Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 3.5e-155 551.6 278 100.0
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 2.2e-141 505.8 278 92.8
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.8e-135 486.1 278 87.4
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 7.5e-118 427.6 280 79.6
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.2e-117 426.0 280 79.3
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 6.6e-114 414.5 278 77.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.6e-112 409.8 280 77.1
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.1e-112 409.5 280 75.4
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.8e-111 406.4 279 75.6
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 1.2e-110 403.7 280 76.8
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 2.0e-110 402.9 279 76.0
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 2.0e-110 402.9 279 75.6
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.8e-109 398.7 278 76.3
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.8e-109 398.7 279 74.9
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 6.4e-109 397.9 279 76.3
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 6.4e-109 397.9 278 74.1
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.1e-108 397.1 279 74.9
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.4e-108 396.7 278 73.0
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 4.2e-108 395.2 280 76.1
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 4.2e-108 395.2 279 74.2
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.7e-107 392.5 271 73.4
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 6.0e-107 391.3 279 72.8
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 8.7e-106 387.5 282 70.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 8.7e-106 387.5 278 72.7
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 8.7e-106 387.5 279 72.4
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.1e-105 387.1 280 73.6
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.9e-105 386.3 281 72.2
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 3.3e-105 385.6 278 71.6
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 9.6e-105 384.0 280 71.4
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 9.6e-105 384.0 281 71.5
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.6e-104 383.3 280 70.0
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 2.1e-104 382.9 279 73.1
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 3.6e-104 382.1 279 70.6
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 3.6e-104 382.1 283 71.0
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 6.2e-104 381.3 279 71.0
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 1.4e-103 380.2 300 67.0
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.4e-103 380.2 281 70.8
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 3.1e-103 379.0 280 71.4
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 3.1e-103 379.0 278 69.8
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 9.0e-103 377.5 267 74.9
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.2e-102 377.1 281 70.1
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 2.0e-102 376.3 280 70.0
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 2.0e-102 376.3 278 69.4
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 3.4e-102 375.6 278 68.7
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.8e-102 374.8 285 68.1
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 7.6e-102 374.4 279 71.0
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.2e-101 372.9 281 69.4
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.9e-101 371.7 280 70.0
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 1.1e-100 370.5 281 70.5
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 1.4e-100 370.2 279 71.0
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 2.4e-100 369.4 205 88.8
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 4.2e-100 368.6 280 70.4
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.2e-99 367.1 288 67.7
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.6e-99 366.7 284 66.9
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 4.6e-99 365.2 285 68.4
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 4.6e-99 365.2 279 69.9
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 7.8e-99 364.4 221 81.0
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.0e-98 362.5 262 69.1
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 3.3e-97 359.0 276 68.5
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 4.3e-97 358.6 286 66.1
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 9.6e-97 357.5 283 68.9
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 1.3e-96 357.1 202 86.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 2.8e-96 355.9 284 66.2
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 4.8e-96 355.1 278 66.5
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.1e-95 354.0 287 65.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.8e-95 353.2 286 65.4
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.8e-95 353.2 202 83.7
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.3e-95 351.7 224 76.3
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 9.0e-95 350.9 264 68.2
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.5e-94 350.1 206 80.6
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 2.0e-94 349.7 278 66.5
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.0e-94 349.7 279 66.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 4.5e-94 348.6 202 82.2
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 4.5e-94 348.6 265 67.9
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 7.6e-94 347.8 264 66.7
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 4.9e-93 345.1 278 66.9
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 8.4e-93 344.4 267 69.3
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.9e-92 343.2 233 71.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.9e-92 343.2 212 80.7
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 3.2e-92 342.4 281 63.7
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 3.2e-92 342.4 281 63.7
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 4.2e-92 342.0 264 65.5
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 5.4e-92 341.7 278 65.5
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 9.3e-92 340.9 226 73.0
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 9.3e-92 340.9 226 73.0
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.2e-91 340.5 284 63.7
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.6e-91 340.1 313 59.7
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 2.1e-91 339.7 263 66.5
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.8e-90 336.7 202 79.2
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 3.0e-90 335.9 279 67.0
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 6.7e-90 334.7 295 61.7
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 2.5e-89 332.8 208 77.9
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.6e-88 330.1 283 64.3
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 3.7e-88 328.9 194 80.9
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 1.8e-87 326.6 267 67.0
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 3.8e-85 318.9 220 72.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.1e-81 307.4 221 69.2
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 2.5e-81 306.2 200 74.5
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.3e-80 303.9 310 56.5
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.1e-79 300.8 178 83.1
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 4.9e-77 292.0 237 65.0
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 9.3e-76 287.7 283 60.4
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 2.3e-74 283.1 281 57.3
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.4e-71 273.9 243 63.8
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.2e-70 270.8 284 57.0
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 4.5e-70 268.9 199 66.8
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 1.6e-67 260.4 179 72.1
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 2.1e-67 260.0 156 80.8
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 6.1e-67 258.5 222 63.1
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 7.4e-65 251.5 287 49.5
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 1.7e-64 250.4 156 76.9
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.6e-62 243.0 202 61.4
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 1.2e-59 234.2 213 56.8
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 1.5e-57 227.3 259 47.5
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 3.5e-54 216.1 194 55.2
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.0e-50 204.5 116 83.6
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 2.2e-45 186.8 177 61.6
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.1e-44 184.5 114 76.3
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.6e-38 164.1 186 50.0
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.5e-25 118.6 69 75.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 8.3e-24 115.2 185 41.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.2e-08 63.9 34 82.4
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 3.7e-08 63.2 62 54.8


User provided reference genes

Program Settings