Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G256932 Glycine max HOM05D000007 ORTHO05D000017 1.5e-80 302.8 146 100.0
Glyma.05G071700 Glycine max HOM05D000007 ORTHO05D000017 3.8e-28 128.6 183 44.8
Glyma.08G353000 Glycine max HOM05D000007 ORTHO05D000017 8.5e-28 127.5 232 37.5
Glyma.19G048800 Glycine max HOM05D000007 ORTHO05D000017 4.2e-27 125.2 211 39.8
Glyma.08G260800 Glycine max HOM05D000007 ORTHO05D000017 1.2e-26 123.6 223 36.8
Glyma.19G048700 Glycine max HOM05D000007 ORTHO05D000017 1.2e-26 123.6 225 38.2
Glyma.05G071400 Glycine max HOM05D000007 ORTHO05D000017 3.6e-26 122.1 232 36.6
Glyma.19G048000 Glycine max HOM05D000007 ORTHO05D000017 2.3e-25 119.4 225 37.3
Glyma.08G229700 Glycine max HOM05D000007 ORTHO05D000017 3.0e-25 119.0 228 32.9
Glyma.19G048500 Glycine max HOM05D000007 ORTHO05D000017 3.0e-25 119.0 225 36.9
Glyma.19G048300 Glycine max HOM05D000007 ORTHO05D000017 5.1e-25 118.2 225 37.3
Glyma.19G049000 Glycine max HOM05D000007 ORTHO05D000017 5.1e-25 118.2 225 37.3
Glyma.19G048100 Glycine max HOM05D000007 ORTHO05D000017 1.1e-24 117.1 225 36.9
Glyma.19G048200 Glycine max HOM05D000007 ORTHO05D000017 1.1e-24 117.1 225 36.9
Glyma.08G352900 Glycine max HOM05D000007 ORTHO05D000017 1.7e-23 113.2 236 33.1
Glyma.17G116300 Glycine max HOM05D000007 ORTHO05D000017 8.2e-23 110.9 224 33.9
Glyma.02G041600 Glycine max HOM05D000007 ORTHO05D000017 4.5e-21 105.1 262 30.2
Glyma.05G071600 Glycine max HOM05D000007 ORTHO05D000017 4.5e-21 105.1 236 32.2
Glyma.08G134900 Glycine max HOM05D000007 ORTHO05D000017 7.7e-21 104.4 238 30.7
Phvul.003G163000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.0e-20 104.0 224 30.8
Phvul.007G235500 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 6.5e-20 101.3 177 35.6
Phvul.007G235400 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 3.2e-19 99.0 103 47.6
TPR.G9294 Trifolium pratense HOM05D000007 ORTHO05D000017 1.2e-18 97.1 234 29.9
Glyma.05G166200 Glycine max HOM05D000007 ORTHO05D000017 3.6e-18 95.5 232 32.8
Phvul.007G236000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 3.0e-17 92.4 101 48.5
Phvul.007G235100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 5.2e-17 91.7 114 43.9
VMungo0464G1686 Vigna mungo HOM05D000007 ORTHO05D000017 8.8e-17 90.9 229 31.4
Glyma.20G075000 Glycine max HOM05D000007 ORTHO05D000017 1.1e-16 90.5 105 46.7
Medtr7g056820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-16 90.1 220 30.5
Medtr4g037465 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-16 89.7 224 29.0
Glyma.06G181300 Glycine max HOM05D000007 ORTHO05D000017 5.7e-16 88.2 223 30.0
Medtr2g079810 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-15 86.7 102 44.1
VMungo0464G0235 Vigna mungo HOM05D000007 ORTHO05D000017 4.8e-15 85.1 235 29.8
VMungo0720G2597 Vigna mungo HOM05D000007 ORTHO05D000017 6.3e-15 84.7 100 44.0
Glyma.19G048600 Glycine max HOM05D000007 ORTHO05D000017 1.8e-14 83.2 188 33.5
Psat3g146120 Pisum sativum HOM05D000007 ORTHO05D000017 1.2e-13 80.5 223 27.4
Medtr7g070900 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-13 80.1 141 34.8
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 2.6e-13 79.3 232 28.9
Medtr0267s0050 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-13 79.3 102 41.2
Medtr3g013950 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-12 77.0 103 38.8
Medtr6g016285 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-12 77.0 223 26.0
Lalb_Chr11g0073821 Lupinus albus HOM05D000007 ORTHO05D000017 2.2e-12 76.3 235 26.4
Medtr6g065510 Medicago truncatula HOM05D000007 ORTHO05D000017 2.9e-12 75.9 159 35.2
Medtr3g083660 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-11 73.9 131 33.6
Glyma.13G114400 Glycine max HOM05D000007 ORTHO05D000017 1.5e-11 73.6 182 31.3
Medtr7g055830 Medicago truncatula HOM05D000007 ORTHO05D000017 7.2e-11 71.2 186 32.3
Medtr3g464500 Medicago truncatula HOM05D000007 ORTHO05D000017 9.4e-11 70.9 218 27.1
Medtr5g046260 Medicago truncatula HOM05D000007 ORTHO05D000017 1.6e-10 70.1 196 26.5
Lalb_Chr12g0201651 Lupinus albus HOM05D000007 ORTHO05D000017 2.1e-10 69.7 111 36.9
Medtr3g464470 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-10 69.7 215 27.0
arahy.Tifrunner.gnm1.ann1.L3WLEE Arachis hypogaea HOM05D000007 ORTHO05D000017 6.1e-10 68.2 103 35.9
VMungo0464G0318 Vigna mungo HOM05D000218 ORTHO05D000125 6.1e-10 68.2 103 35.9
Medtr1g015740 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-09 67.0 187 31.0
Glyma.18G162820 Glycine max HOM05D000007 ORTHO05D000017 1.8e-09 66.6 163 31.3
Lj1g0005824 Lotus japonicus HOM05D000007 ORTHO05D000017 1.8e-09 66.6 231 24.7
Medtr6g088385 Medicago truncatula HOM05D000007 ORTHO05D000017 3.0e-09 65.9 143 34.3
Psat3g123360 Pisum sativum HOM05D000007 ORTHO05D000017 3.0e-09 65.9 224 24.1
arahy.Tifrunner.gnm1.ann1.8KF55G Arachis hypogaea HOM05D000007 ORTHO05D000017 5.2e-09 65.1 98 35.7
Phvul.007G235200 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 5.2e-09 65.1 167 27.5
arahy.Tifrunner.gnm1.ann1.D6FMYT Arachis hypogaea HOM05D000007 ORTHO05D000017 6.7e-09 64.7 106 34.0
arahy.Tifrunner.gnm1.ann1.KM85J5 Arachis hypogaea HOM05D000007 ORTHO05D000017 6.7e-09 64.7 99 35.4
arahy.Tifrunner.gnm1.ann1.HR5IAZ Arachis hypogaea HOM05D000007 ORTHO05D000017 1.2e-08 63.9 98 35.7
VMungo0647G1378 Vigna mungo HOM05D040773 ORTHO05D023177 1.5e-08 63.5 43 67.4
arahy.Tifrunner.gnm1.ann1.DVHS31 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.0e-08 63.2 106 34.0
arahy.Tifrunner.gnm1.ann1.YU78V4 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.0e-08 63.2 106 34.0
Glyma.17G044800 Glycine max HOM05D008179 ORTHO05D009362 2.0e-08 63.2 107 35.5
Medtr5g046290 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 63.2 211 23.7
Medtr5g046300 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-08 63.2 211 23.7
TPR.G17685 Trifolium pratense HOM05D000007 ORTHO05D000017 2.0e-08 63.2 101 35.6
Ca_06730_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.6e-08 62.8 117 31.6
Lalb_Chr20g0118571 Lupinus albus HOM05D000007 ORTHO05D000017 2.6e-08 62.8 120 35.8
arahy.Tifrunner.gnm1.ann1.ZMJT2S Arachis hypogaea HOM05D000007 ORTHO05D000017 4.4e-08 62.0 106 34.9
Medtr7g078940 Medicago truncatula HOM05D000007 ORTHO05D000017 4.4e-08 62.0 77 40.3
Medtr2g021155 Medicago truncatula HOM05D000007 ORTHO05D000017 7.5e-08 61.2 142 36.6
arahy.Tifrunner.gnm1.ann1.GL2JS2 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.3e-07 60.5 98 33.7
arahy.Tifrunner.gnm1.ann1.KM0X5H Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-07 60.1 98 34.7
arahy.Tifrunner.gnm1.ann1.VMDZ8Z Arachis hypogaea HOM05D000007 ORTHO05D000017 1.7e-07 60.1 98 32.7
Medtr2g006360 Medicago truncatula HOM05D000007 ORTHO05D000017 1.7e-07 60.1 171 31.6
Psat0s3074g0080 Pisum sativum HOM05D000007 ORTHO05D000017 1.7e-07 60.1 130 31.5
arahy.Tifrunner.gnm1.ann1.0KH0LV Arachis hypogaea HOM05D000007 ORTHO05D000017 2.2e-07 59.7 128 29.7
arahy.Tifrunner.gnm1.ann1.XZUA4K Arachis hypogaea HOM05D000007 ORTHO05D000017 2.2e-07 59.7 128 29.7
Ca_00817_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.2e-07 59.7 235 26.4
SalBow1G3096 Salvia bowleyana HOM05D000007 ORTHO05D000017 2.2e-07 59.7 187 27.8
TPR.G17012 Trifolium pratense HOM05D000007 ORTHO05D000017 2.2e-07 59.7 53 58.5
arahy.Tifrunner.gnm1.ann1.IGUP8B Arachis hypogaea HOM05D000007 ORTHO05D000017 2.8e-07 59.3 95 31.6
Ca_21498_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 3.7e-07 58.9 79 39.2
Medtr1g058190 Medicago truncatula HOM05D000007 ORTHO05D000017 3.7e-07 58.9 204 26.0
PSO170G6650 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-07 58.9 136 31.6
Medtr3g036430 Medicago truncatula HOM05D000007 ORTHO05D000017 4.8e-07 58.5 196 28.6
SalBow1G4077 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.8e-07 58.5 187 27.8
TPR.G6427 Trifolium pratense HOM05D000007 ORTHO05D000017 4.8e-07 58.5 225 24.0
arahy.Tifrunner.gnm1.ann1.J50TIT Arachis hypogaea HOM05D000007 ORTHO05D000017 6.3e-07 58.2 97 34.0
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 6.3e-07 58.2 156 30.8
Medtr3g080370 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-07 58.2 222 24.8
Medtr7g070880 Medicago truncatula HOM05D000007 ORTHO05D000017 6.3e-07 58.2 85 37.6
TPR.G9301 Trifolium pratense HOM05D000007 ORTHO05D000017 6.3e-07 58.2 228 25.9
VMungo0647G0008 Vigna mungo HOM05D040773 ORTHO05D023177 6.3e-07 58.2 43 62.8
arahy.Tifrunner.gnm1.ann1.PR6200 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-07 57.8 200 28.0
arahy.Tifrunner.gnm1.ann1.S3Q5J6 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.2e-07 57.8 96 33.3
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 8.2e-07 57.8 63 47.6
Lj2g0028230 Lotus japonicus HOM05D000007 ORTHO05D000017 8.2e-07 57.8 112 33.9
Medtr5g046280 Medicago truncatula HOM05D000007 ORTHO05D000017 8.2e-07 57.8 103 29.1
Psat7g250080 Pisum sativum HOM05D000007 ORTHO05D000017 8.2e-07 57.8 230 25.7
VMungo0464G1399 Vigna mungo HOM05D000007 ORTHO05D000017 8.2e-07 57.8 104 34.6
arahy.Tifrunner.gnm1.ann1.NIV6PW Arachis hypogaea HOM05D000007 ORTHO05D000017 1.1e-06 57.4 98 31.6
CAN.G645.21 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-06 57.4 134 27.6
Cc03_g06540 Coffea canephora HOM05D000007 ORTHO05D000017 1.1e-06 57.4 180 31.1
Glyma.18G160600 Glycine max HOM05D000007 ORTHO05D000017 1.1e-06 57.4 102 36.3
Medtr6g055210 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-06 57.4 119 32.8
Medtr7g055987 Medicago truncatula HOM05D000007 ORTHO05D000017 1.1e-06 57.4 221 24.9
Psat6g108160 Pisum sativum HOM05D000007 ORTHO05D000017 1.1e-06 57.4 158 29.7
QL04p026904 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-06 57.4 122 31.1
SalBow1G3456 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.1e-06 57.4 163 28.8
arahy.Tifrunner.gnm1.ann1.7PDR7X Arachis hypogaea HOM05D000007 ORTHO05D000017 1.4e-06 57.0 100 34.0
arahy.Tifrunner.gnm1.ann1.JCQ2WP Arachis hypogaea HOM05D000007 ORTHO05D000017 1.4e-06 57.0 99 32.3
arahy.Tifrunner.gnm1.ann1.XAL4KA Arachis hypogaea HOM05D000007 ORTHO05D000017 1.4e-06 57.0 96 33.3
Medtr7g078040 Medicago truncatula HOM05D000007 ORTHO05D000017 1.4e-06 57.0 76 38.2
arahy.Tifrunner.gnm1.ann1.GJED4B Arachis hypogaea HOM05D000007 ORTHO05D000017 1.8e-06 56.6 96 33.3
Ca_08886_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.8e-06 56.6 101 32.7
Medtr7g077970 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 56.6 113 32.7
Medtr7g113500 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 56.6 75 36.0
Actinidia38708 Actinidia chinensis HOM05D000007 ORTHO05D013648 2.4e-06 56.2 118 39.0
arahy.Tifrunner.gnm1.ann1.REKI49 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.4e-06 56.2 98 31.6
Ca_05139_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.4e-06 56.2 78 39.7
Medtr3g011020 Medicago truncatula HOM05D000007 ORTHO05D000017 2.4e-06 56.2 204 28.9
TPR.G9299 Trifolium pratense HOM05D000007 ORTHO05D000017 2.4e-06 56.2 60 43.3
arahy.Tifrunner.gnm1.ann1.D1G4W2 Arachis hypogaea HOM05D000007 ORTHO05D000017 3.1e-06 55.8 98 31.6
arahy.Tifrunner.gnm1.ann1.GU7NVA Arachis hypogaea HOM05D000007 ORTHO05D000017 3.1e-06 55.8 67 38.8
Medtr2g010900 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 55.8 103 34.0
Medtr7g070937 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 55.8 79 40.5
Medtr7g077070 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 55.8 77 37.7
Medtr7g445890 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-06 55.8 206 25.7
Psat0ss1860g0280 Pisum sativum HOM05D000007 ORTHO05D000017 3.1e-06 55.8 98 34.7
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 4.1e-06 55.5 122 30.3
Haze_12846 Corylus avellana HOM05D000007 ORTHO05D000039 4.1e-06 55.5 151 30.5
Glyma.18G167700 Glycine max HOM05D000007 ORTHO05D000017 4.1e-06 55.5 102 35.3
Glyma.18G168800 Glycine max HOM05D000007 ORTHO05D000017 4.1e-06 55.5 102 35.3
Lj2C694T2 Lonicera japonica HOM05D000007 ORTHO05D000017 4.1e-06 55.5 135 31.9
Medtr2g010950 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 55.5 102 32.4
Medtr4g013185 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 55.5 75 40.0
Medtr4g030980 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 55.5 104 31.7
arahy.Tifrunner.gnm1.ann1.0HK6QF Arachis hypogaea HOM05D000007 ORTHO05D000017 5.3e-06 55.1 98 33.7
Medtr2g029990 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 55.1 113 37.2
Medtr7g056760 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 55.1 107 32.7
Medtr7g091630 Medicago truncatula HOM05D000007 ORTHO05D000017 5.3e-06 55.1 79 38.0
Phvul.007G113100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 5.3e-06 55.1 64 48.4
Psat3g106480 Pisum sativum HOM05D000007 ORTHO05D000017 5.3e-06 55.1 106 34.0
Psat7g250120 Pisum sativum HOM05D000007 ORTHO05D000017 5.3e-06 55.1 107 36.4
Aqoxy5G03305 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 7.0e-06 54.7 48 52.1
CAN.G615.7 Capsicum annuum HOM05D000007 ORTHO05D000017 7.0e-06 54.7 147 29.3
Ca_00699_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 7.0e-06 54.7 102 36.3
Ca_13449_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 7.0e-06 54.7 216 25.9
Lalb_Chr18g0055981 Lupinus albus HOM05D000007 ORTHO05D000017 7.0e-06 54.7 105 37.1
Medtr0128s0110 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 54.7 45 51.1
Medtr3g096280 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 54.7 108 33.3
Medtr7g056023 Medicago truncatula HOM05D000007 ORTHO05D000017 7.0e-06 54.7 193 29.0
Peaxi162Scf00047g00914 Petunia axillaris HOM05D000007 ORTHO05D014560 7.0e-06 54.7 139 30.2
Psat0ss10486g0160 Pisum sativum HOM05D000007 ORTHO05D000017 7.0e-06 54.7 105 33.3
TPR.G24554 Trifolium pratense HOM05D000007 ORTHO05D000017 7.0e-06 54.7 71 40.8
Glyma.18G160800 Glycine max HOM05D000007 ORTHO05D000017 9.1e-06 54.3 102 34.3
Lj6g0010833 Lotus japonicus HOM05D000007 ORTHO05D000017 9.1e-06 54.3 110 32.7
Medtr2g010935 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 54.3 76 35.5
Medtr7g062060 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 54.3 101 33.7
Medtr7g070440 Medicago truncatula HOM05D000007 ORTHO05D000017 9.1e-06 54.3 103 35.0
VMungo0720G2115 Vigna mungo HOM05D000007 ORTHO05D000017 9.1e-06 54.3 63 47.6


User provided reference genes

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