Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 1.1e-46 189.5 92 100.0
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 2.6e-43 178.3 92 93.5
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 3.0e-39 164.9 92 85.9
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 1.7e-29 132.5 92 70.7
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 1.1e-28 129.8 96 75.0
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 1.4e-28 129.4 92 71.7
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-27 124.8 85 80.0
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.5e-27 124.4 92 69.6
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 1.3e-26 122.9 88 70.5
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 1.7e-26 122.5 80 77.5
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 3.8e-26 121.3 88 69.3
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 7.2e-25 117.1 93 67.7
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 7.2e-25 117.1 93 67.7
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 9.4e-25 116.7 82 70.7
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 2.7e-24 115.2 92 68.5
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 2.7e-24 115.2 92 68.5
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 1.0e-23 113.2 83 69.9
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.0e-23 111.3 89 65.2
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.0e-23 111.3 89 65.2
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 5.2e-23 110.9 90 68.9
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 9.8e-22 106.7 92 63.0
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.8e-21 105.1 90 61.1
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-19 99.8 98 57.1
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 1.6e-19 99.4 94 62.8
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-19 99.0 95 58.9
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-19 99.0 95 58.9
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-19 99.0 87 65.5
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 2.7e-19 98.6 91 65.9
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 5.9e-19 97.4 87 63.2
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-18 95.5 85 62.4
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-18 95.5 85 62.4
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-18 95.5 87 64.4
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 5.0e-18 94.4 86 61.6
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 8.5e-18 93.6 85 61.2
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 4.2e-17 91.3 81 60.5
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-16 89.7 81 59.3
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.0e-15 86.7 86 60.5
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 2.3e-15 85.5 86 58.1
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 8.8e-15 83.6 84 57.1
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-14 83.2 86 54.7
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-14 82.8 82 52.4
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-14 82.4 84 54.8
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.0e-14 82.4 83 53.0
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.0e-14 82.4 83 53.0
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 5.7e-14 80.9 86 52.3
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 1.3e-13 79.7 86 52.3
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 1.7e-13 79.3 82 50.0
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 2.2e-13 79.0 86 52.3
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 2.8e-13 78.6 86 54.7
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 2.8e-13 78.6 86 54.7
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-13 78.6 84 52.4
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-13 78.6 84 52.4
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 4.9e-13 77.8 81 50.6
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 4.9e-13 77.8 82 47.6
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.9e-13 77.8 83 50.6
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.3e-13 77.0 80 55.0
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 1.1e-12 76.6 82 51.2
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 1.4e-12 76.3 83 49.4
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 1.8e-12 75.9 74 54.1
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 2.4e-12 75.5 88 51.1
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 2.4e-12 75.5 88 51.1
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 2.4e-12 75.5 84 51.2
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 5.4e-12 74.3 81 50.6
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 5.4e-12 74.3 82 48.8
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 9.2e-12 73.6 84 51.2
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 2.0e-11 72.4 83 44.6
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 2.7e-11 72.0 91 48.4
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 2.7e-11 72.0 91 48.4
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 4.5e-11 71.2 75 50.7
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 2.9e-10 68.6 84 46.4
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.5e-09 66.2 86 46.5
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.5e-09 66.2 86 46.5
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-09 65.1 86 45.3
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.3e-09 65.1 87 48.3
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 2.1e-08 62.4 82 43.9
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.7e-08 61.2 85 45.9
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 4.7e-08 61.2 89 47.2
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.1e-08 60.8 84 48.8
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.1e-08 60.8 84 48.8
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 6.1e-08 60.8 75 48.0
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 8.0e-08 60.5 83 47.0
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.0e-07 60.1 88 44.3
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.0e-07 60.1 78 44.9
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 1.8e-07 59.3 81 46.9
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.8e-07 59.3 84 47.6
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.3e-07 58.9 83 45.8
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 3.0e-07 58.5 87 46.0
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 3.0e-07 58.5 82 43.9
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 4.0e-07 58.2 72 45.8
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.0e-07 58.2 84 45.2
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 4.0e-07 58.2 85 43.5
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.2e-07 57.8 84 47.6
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 6.8e-07 57.4 71 43.7
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 6.8e-07 57.4 86 43.0
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 6.8e-07 57.4 84 47.6
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 8.9e-07 57.0 71 45.1
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.9e-07 57.0 85 45.9
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.9e-07 57.0 85 45.9
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.9e-07 57.0 85 45.9
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.9e-07 57.0 84 46.4
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.9e-07 57.0 85 45.9
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.5e-06 56.2 75 48.0
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 1.5e-06 56.2 79 43.0
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 1.5e-06 56.2 74 44.6
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 2.0e-06 55.8 83 44.6
DCAR_002292 Daucus carota HOM05D002165 ORTHO05D001531 2.0e-06 55.8 83 39.8
VMungo1383G2747 Vigna mungo HOM05D008018 ORTHO05D001531 2.0e-06 55.8 78 41.0
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.4e-06 55.1 81 44.4
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 3.4e-06 55.1 85 43.5
DCAR_001887 Daucus carota HOM05D002165 ORTHO05D001531 4.4e-06 54.7 83 39.8
Manes.15G075800 Manihot esculenta HOM05D002165 ORTHO05D001531 4.4e-06 54.7 89 42.7
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 5.7e-06 54.3 77 46.8
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 5.7e-06 54.3 76 48.7
Ciclev10010714m.g Citrus clementina HOM05D002165 ORTHO05D001531 7.5e-06 53.9 85 44.7
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.8e-06 53.5 83 47.0
Manes.03G213400 Manihot esculenta HOM05D002165 ORTHO05D001531 9.8e-06 53.5 83 48.2


User provided reference genes

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