Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 5.7e-245 850.5 437 100.0
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 4.1e-211 738.0 440 87.0
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 2.0e-210 735.7 439 86.3
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.4e-179 633.3 427 76.3
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 1.9e-179 632.9 419 77.8
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 3.5e-178 628.6 422 76.5
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 2.1e-175 619.4 434 74.4
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 6.4e-172 607.8 419 74.2
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 5.6e-160 568.2 439 67.2
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 6.4e-156 554.7 465 63.4
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 2.7e-146 522.7 434 63.6
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.9e-144 516.5 418 63.6
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 2.1e-143 513.1 419 63.7
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.0e-140 504.2 407 63.6
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.0e-140 504.2 407 63.6
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 4.6e-138 495.4 426 60.8
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 1.0e-137 494.2 434 60.6
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.3e-137 493.8 414 62.1
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 3.9e-137 492.3 434 61.1
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 1.5e-136 490.3 403 64.3
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 1.6e-135 486.9 427 59.7
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.1e-134 482.6 427 59.5
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 5.3e-134 481.9 418 60.0
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 4.5e-133 478.8 418 60.5
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 1.3e-132 477.2 445 58.2
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 2.2e-132 476.5 434 59.4
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 2.5e-131 473.0 296 81.1
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 5.5e-131 471.9 417 61.2
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 1.6e-130 470.3 406 60.6
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 6.1e-130 468.4 446 56.1
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 5.1e-129 465.3 408 60.5
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 7.4e-128 461.5 440 56.4
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.5e-125 453.8 446 56.1
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.5e-125 453.8 450 54.4
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 2.6e-125 453.0 436 56.9
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.7e-124 450.3 440 54.1
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 3.2e-123 446.0 407 58.2
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 5.1e-121 438.7 411 57.2
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 1.3e-119 434.1 425 54.1
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 2.2e-119 433.3 413 55.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.8e-119 433.0 371 58.8
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 1.2e-117 427.6 437 53.3
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 5.9e-117 425.2 402 55.5
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 7.7e-117 424.9 402 55.5
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 1.1e-115 421.0 402 55.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 1.1e-115 421.0 425 51.8
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 4.2e-115 419.1 400 54.2
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 4.2e-115 419.1 404 54.0
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 5.5e-115 418.7 402 54.7
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 4.7e-114 415.6 426 51.9
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 2.3e-113 413.3 412 52.9
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 8.8e-113 411.4 400 53.5
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 8.8e-113 411.4 409 53.5
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 5.7e-112 408.7 409 53.5
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 7.4e-112 408.3 400 52.8
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 7.4e-112 408.3 424 50.5
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.3e-111 407.5 425 51.3
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 1.3e-111 407.5 367 57.2
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.8e-111 405.6 405 52.3
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 2.4e-110 403.3 403 51.4
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 9.1e-110 401.4 396 53.8
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 9.1e-110 401.4 431 49.7
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.2e-109 401.0 349 58.7
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.6e-109 400.6 409 52.3
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.5e-109 399.1 409 52.6
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.7e-108 397.1 438 50.0
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.9e-108 396.4 432 49.8
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 5.0e-108 395.6 439 49.7
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.5e-107 394.0 401 50.1
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 7.2e-107 391.7 441 48.8
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 3.6e-106 389.4 404 49.8
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 6.1e-106 388.7 354 58.8
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 8.0e-106 388.3 402 52.7
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 4.0e-105 386.0 435 48.7
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 9.7e-104 381.3 369 51.8
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 8.3e-103 378.3 432 48.8
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.0e-101 373.6 365 54.2
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.0e-101 373.6 409 49.9
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 2.7e-101 373.2 401 48.9
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 2.1e-98 363.6 416 48.6
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 7.5e-96 355.1 402 50.0
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 7.5e-96 355.1 327 61.2
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 5.0e-92 342.4 420 45.7
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 6.1e-90 335.5 419 45.1
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 7.5e-88 328.6 331 56.8
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 2.8e-87 326.6 435 44.6
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.4e-86 324.3 408 44.9
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.2e-85 321.2 366 47.8
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 4.4e-80 302.8 422 42.7
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 8.3e-79 298.5 317 56.5
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.0e-76 291.6 300 53.3
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 7.5e-72 275.4 363 44.9
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 3.3e-67 260.0 440 34.3
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.4e-65 254.6 237 54.9
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 2.0e-64 250.8 397 39.3
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 6.4e-63 245.7 367 40.3
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 1.2e-61 241.5 395 37.2
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 2.7e-61 240.4 426 35.0
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.1e-59 235.0 204 54.4
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 3.6e-50 203.4 197 48.7
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 5.6e-43 179.5 208 49.5
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 3.7e-34 150.2 204 41.7
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 4.8e-26 123.2 86 65.1
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.9e-22 111.3 108 50.9
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 4.8e-18 96.7 283 29.3
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.5e-15 86.3 62 51.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.6e-13 80.5 56 53.6
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 4.6e-13 80.1 112 42.9
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.1e-13 79.7 62 51.6
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.9e-06 58.2 96 37.5
Zm00001eb061610 Zea mays HOM05D001726 ORTHO05D001761 7.2e-06 56.2 149 25.5
Ah.01g017160 Amaranthus hybridus HOM05D001726 ORTHO05D001761 9.4e-06 55.8 150 25.3


User provided reference genes

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