Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 7.9e-45 183.3 89 100.0
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 4.4e-19 97.8 143 45.5
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.6e-16 89.4 136 44.9
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 2.0e-16 89.0 142 43.0
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 3.5e-16 88.2 142 43.0
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 3.5e-16 88.2 142 43.0
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 7.7e-16 87.0 142 42.3
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 7.7e-16 87.0 142 43.0
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 1.3e-15 86.3 142 41.5
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 1.7e-15 85.9 141 41.8
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 5.5e-14 80.9 142 38.7
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 7.2e-14 80.5 142 38.0
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.6e-13 79.3 142 37.3
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 3.6e-13 78.2 142 38.0
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 1.0e-12 76.6 142 38.0
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.0e-12 76.6 142 39.4
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.4e-12 76.3 142 38.7
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 1.8e-12 75.9 142 38.0
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 3.0e-12 75.1 141 37.6
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 5.2e-12 74.3 140 38.6
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 2.0e-11 72.4 142 37.3
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 2.6e-11 72.0 146 36.3
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 3.4e-11 71.6 139 38.1
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 4.4e-11 71.2 146 34.9
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 4.4e-11 71.2 146 34.9
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 5.7e-11 70.9 142 37.3
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 5.7e-11 70.9 142 36.6
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 9.8e-11 70.1 133 36.1
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 9.8e-11 70.1 137 37.2
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 2.2e-10 68.9 146 34.9
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.2e-10 68.9 71 53.5
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 2.2e-10 68.9 72 54.2
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 4.9e-10 67.8 146 34.9
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.1e-09 66.6 139 36.0
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 1.4e-09 66.2 146 34.2
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.4e-09 66.2 146 34.2
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 1.8e-09 65.9 142 35.2
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 2.4e-09 65.5 71 52.1
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 4.1e-09 64.7 137 35.0
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 5.4e-09 64.3 146 33.6
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 1.6e-08 62.8 122 38.5
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 2.7e-08 62.0 71 53.5
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 2.7e-08 62.0 74 52.7
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 4.5e-08 61.2 70 55.7
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 5.9e-08 60.8 137 33.6
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.7e-07 59.3 136 33.8
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 1.7e-07 59.3 140 32.9
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 2.9e-07 58.5 133 33.8
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 3.9e-07 58.2 71 50.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.1e-06 56.6 71 47.9
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 1.9e-06 55.8 71 45.1
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 3.3e-06 55.1 139 32.4
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 4.3e-06 54.7 71 45.1
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 4.3e-06 54.7 66 51.5
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 9.5e-06 53.5 75 44.0
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 9.5e-06 53.5 71 49.3


User provided reference genes

Program Settings