Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G219600 Glycine max HOM05D008325 ORTHO05D010336 2.2e-61 238.8 124 100.0
Glyma.03G222400 Glycine max HOM05D008325 ORTHO05D010336 2.6e-30 135.6 125 63.2
VMungo1383G3369 Vigna mungo HOM05D008325 ORTHO05D010336 4.0e-18 95.1 127 55.1
Phvul.001G215800 Phaseolus vulgaris HOM05D008325 ORTHO05D010336 5.4e-15 84.7 108 51.9
QL12p033939 Quercus lobata HOM05D008325 ORTHO05D010336 1.2e-09 67.0 126 42.1
Duzib133G0176 Durio zibethinus HOM05D008325 ORTHO05D010336 5.7e-09 64.7 124 34.7
Glyma.02G009500 Glycine max HOM05D008325 ORTHO05D010336 7.5e-09 64.3 132 41.7
Manes.01G232100 Manihot esculenta HOM05D008325 ORTHO05D010336 9.8e-09 63.9 128 42.2
Dinv33149 Davidia involucrata HOM05D008325 ORTHO05D010336 1.7e-08 63.2 103 39.8
Nn4g25439 Nelumbo nucifera HOM05D008325 ORTHO05D010336 1.7e-08 63.2 105 40.0
Gohir.D12G125800 Gossypium hirsutum HOM05D008325 ORTHO05D010336 3.7e-08 62.0 93 39.8
Gorai.008G136800 Gossypium raimondii HOM05D008325 ORTHO05D010336 3.7e-08 62.0 93 39.8
Lj5g0017973 Lotus japonicus HOM05D008325 ORTHO05D010336 3.7e-08 62.0 128 39.1
QL12p034783 Quercus lobata HOM05D008325 ORTHO05D010336 4.9e-08 61.6 126 41.3
arahy.Tifrunner.gnm1.ann1.FZ214Z Arachis hypogaea HOM05D008325 ORTHO05D010336 6.3e-08 61.2 105 41.0
Gohir.A12G122200 Gossypium hirsutum HOM05D008325 ORTHO05D010336 1.4e-07 60.1 128 35.9
TAR365G0423 Trochodendron aralioides HOM05D008325 ORTHO05D010336 1.4e-07 60.1 117 38.5
Atru.chr5.921 Acer truncatum HOM05D008325 ORTHO05D010336 3.1e-07 58.9 139 35.3
CiPaw.07G122000 Carya illinoinensis HOM05D008325 ORTHO05D010336 3.1e-07 58.9 107 44.9
Potri.002G190800 Populus trichocarpa HOM05D008325 ORTHO05D010336 4.1e-07 58.5 127 39.4
RcHm_v2.0_Chr3g0486821 Rosa chinensis HOM05D008325 ORTHO05D010336 7.0e-07 57.8 123 38.2
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 9.2e-07 57.4 124 40.3
Sabra02G0164700 Salix brachista HOM05D008325 ORTHO05D010336 1.2e-06 57.0 123 35.8
COL.COLO4_23173 Corchorus olitorius HOM05D008325 ORTHO05D010336 1.6e-06 56.6 124 37.1
CiPaw.08G085200 Carya illinoinensis HOM05D008325 ORTHO05D010336 4.5e-06 55.1 117 41.0
Duzib138G1904 Durio zibethinus HOM05D008325 ORTHO05D010336 4.5e-06 55.1 119 35.3
Oeu038060.1 Olea europaea HOM05D008325 ORTHO05D010336 4.5e-06 55.1 131 34.4
Sabra14G0086000 Salix brachista HOM05D011843 ORTHO05D012858 5.9e-06 54.7 118 39.8
Dinv12107 Davidia involucrata HOM05D008325 ORTHO05D010336 7.7e-06 54.3 107 39.3


User provided reference genes

Program Settings