Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.7e-101 372.9 218 100.0
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 2.2e-64 249.6 187 78.6
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 7.4e-60 234.6 182 74.2
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 4.5e-57 225.3 181 71.3
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 4.0e-50 202.2 188 66.5
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 2.3e-45 186.4 187 60.4
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.8e-42 176.8 182 62.1
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 1.2e-41 174.1 179 58.7
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.5e-41 173.7 191 58.1
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.5e-41 173.7 163 66.3
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 1.9e-39 166.8 169 58.0
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.9e-39 166.8 200 54.0
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 4.2e-39 165.6 178 56.7
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 5.5e-39 165.2 165 57.0
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 3.6e-38 162.5 179 55.3
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 6.1e-38 161.8 183 54.6
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.8e-37 160.2 169 60.4
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 5.1e-37 158.7 156 62.8
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 5.1e-37 158.7 162 55.6
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 1.1e-36 157.5 187 52.9
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.9e-36 156.8 181 55.8
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 3.3e-36 156.0 181 54.7
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 4.3e-36 155.6 167 59.3
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 9.7e-36 154.5 167 56.3
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 9.7e-36 154.5 181 53.6
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 2.2e-35 153.3 173 54.9
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 2.8e-35 152.9 182 52.7
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 4.8e-35 152.1 165 54.5
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.4e-34 150.6 186 52.2
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.1e-34 149.4 178 52.2
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 3.1e-34 149.4 165 55.2
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 4.1e-34 149.1 178 51.7
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.1e-34 149.1 178 51.7
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 5.3e-34 148.7 180 55.6
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 9.1e-34 147.9 186 51.1
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.5e-33 147.1 183 53.0
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.6e-33 146.4 220 43.2
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 2.6e-33 146.4 151 58.9
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 3.4e-33 146.0 176 51.1
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 7.7e-33 144.8 170 53.5
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.0e-32 144.4 187 51.3
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.0e-32 144.4 161 55.3
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.0e-32 144.4 174 50.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.2e-32 143.3 178 55.6
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.2e-32 143.3 184 48.4
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 2.9e-32 142.9 207 46.4
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 3.8e-32 142.5 180 48.3
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 5.0e-32 142.1 181 49.2
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 6.5e-32 141.7 185 51.9
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 6.5e-32 141.7 216 44.9
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 8.5e-32 141.4 159 55.3
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 8.5e-32 141.4 181 49.2
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.1e-31 141.0 179 49.2
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 1.4e-31 140.6 178 48.3
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 1.9e-31 140.2 176 50.0
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.9e-31 140.2 217 44.7
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.9e-31 140.2 177 52.5
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 1.9e-31 140.2 204 45.1
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 2.5e-31 139.8 179 48.6
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 4.2e-31 139.0 156 60.9
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 7.2e-31 138.3 153 55.6
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.2e-30 137.5 198 49.5
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.6e-30 137.1 178 49.4
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 3.6e-30 136.0 174 47.7
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 3.6e-30 136.0 178 45.5
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.6e-30 136.0 163 52.1
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 4.6e-30 135.6 164 50.6
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 7.9e-30 134.8 210 43.8
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 7.9e-30 134.8 162 54.9
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 7.9e-30 134.8 215 45.6
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.8e-29 133.7 193 47.2
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 2.3e-29 133.3 182 53.3
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 5.1e-29 132.1 161 51.6
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-28 130.6 166 46.4
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 2.0e-28 130.2 205 42.9
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.6e-28 129.8 160 48.1
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 5.7e-28 128.6 178 51.1
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 7.4e-28 128.3 164 51.8
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 9.7e-28 127.9 202 41.1
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.3e-27 127.5 186 48.4
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 1.7e-27 127.1 164 51.8
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 6.3e-27 125.2 161 54.0
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 1.4e-26 124.0 193 45.1
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-26 123.6 189 43.4
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 1.8e-26 123.6 181 51.9
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 4.1e-26 122.5 183 49.2
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 4.5e-25 119.0 190 47.9
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.0e-24 117.9 189 43.9
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.2e-24 116.7 155 51.6
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 2.9e-24 116.3 147 49.7
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.5e-23 113.2 143 48.3
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 4.2e-23 112.5 188 44.7
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 9.4e-23 111.3 180 40.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 9.4e-23 111.3 180 40.0
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 2.7e-22 109.8 180 39.4
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 2.7e-22 109.8 180 40.0
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 7.9e-22 108.2 178 39.3
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 1.0e-21 107.8 180 40.0
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 6.7e-21 105.1 153 49.0
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 7.4e-20 101.7 157 45.2
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.8e-19 99.8 152 46.7
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.4e-18 96.7 113 53.1
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 3.1e-18 96.3 152 46.1
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 5.3e-18 95.5 141 48.9
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 7.0e-18 95.1 183 38.8
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.0e-16 91.3 181 42.5
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 5.0e-16 89.0 166 44.0
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 1.1e-15 87.8 151 47.7
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 2.5e-15 86.7 181 38.7
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.2e-15 85.1 125 48.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 7.2e-15 85.1 123 52.0
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.2e-14 84.3 98 56.1
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.8e-13 80.5 65 67.7
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 1.7e-11 73.9 63 66.7
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.8e-10 70.5 69 53.6
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 2.7e-09 66.6 47 74.5
Mapoly0001s0215 Marchantia polymorpha HOM05D006618 ORTHO05D008291 7.7e-09 65.1 207 32.9
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 1.1e-07 61.2 67 53.7
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 3.2e-07 59.7 158 32.3


User provided reference genes

Program Settings