Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 1.4e-113 412.9 207 100.0
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 2.9e-74 282.3 180 82.8
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.4e-73 280.0 180 81.7
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 2.4e-60 236.1 182 70.9
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.2e-57 225.7 177 66.1
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 4.4e-54 215.3 185 64.9
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 6.5e-50 201.4 182 61.5
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 9.5e-49 197.6 180 60.6
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 3.6e-48 195.7 110 85.5
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 2.3e-47 193.0 172 59.9
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 7.5e-46 188.0 139 69.1
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 8.3e-45 184.5 180 57.2
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 1.1e-44 184.1 111 80.2
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 1.1e-44 184.1 160 60.0
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 1.4e-44 183.7 176 56.8
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.8e-44 183.3 128 73.4
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.1e-44 182.2 118 74.6
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 4.1e-44 182.2 111 80.2
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 4.1e-44 182.2 111 80.2
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 9.2e-44 181.0 128 71.9
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 2.0e-43 179.9 149 63.1
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 2.0e-43 179.9 128 70.3
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 2.7e-43 179.5 149 63.1
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 4.5e-43 178.7 183 55.7
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 5.9e-43 178.3 128 71.1
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.0e-42 177.6 122 71.3
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 1.0e-42 177.6 122 71.3
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 1.7e-42 176.8 136 65.4
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 2.9e-42 176.0 117 75.2
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 2.9e-42 176.0 173 58.4
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 2.9e-42 176.0 193 52.8
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.8e-42 175.6 105 80.0
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.8e-42 175.6 156 60.9
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 5.0e-42 175.3 104 78.8
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 5.0e-42 175.3 136 64.7
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 6.6e-42 174.9 136 65.4
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 6.6e-42 174.9 136 65.4
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 6.6e-42 174.9 165 56.4
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 8.6e-42 174.5 145 62.8
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 1.1e-41 174.1 149 61.1
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.1e-41 174.1 141 62.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 1.9e-41 173.3 169 53.8
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 4.3e-41 172.2 158 60.1
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 4.3e-41 172.2 115 73.9
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 5.6e-41 171.8 108 74.1
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 5.6e-41 171.8 161 58.4
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 9.5e-41 171.0 138 61.6
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 9.5e-41 171.0 107 74.8
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 1.2e-40 170.6 110 71.8
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 1.6e-40 170.2 138 65.2
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 1.6e-40 170.2 161 57.8
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.8e-40 169.5 122 70.5
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 2.8e-40 169.5 102 78.4
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 4.7e-40 168.7 102 77.5
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 8.0e-40 167.9 171 57.3
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 1.4e-39 167.2 115 68.7
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 2.3e-39 166.4 103 74.8
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 3.0e-39 166.0 117 67.5
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 3.0e-39 166.0 108 69.4
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 6.8e-39 164.9 108 68.5
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 8.9e-39 164.5 144 61.1
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 1.5e-38 163.7 184 52.2
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 1.5e-38 163.7 170 52.4
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.5e-38 163.7 104 72.1
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 1.5e-38 163.7 104 73.1
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 3.4e-38 162.5 109 72.5
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 5.8e-38 161.8 116 67.2
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 5.8e-38 161.8 153 55.6
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-38 161.8 109 73.4
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-38 161.8 109 73.4
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 5.8e-38 161.8 109 73.4
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 5.8e-38 161.8 107 67.3
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 7.5e-38 161.4 116 64.7
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.3e-37 160.6 107 68.2
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 1.3e-37 160.6 114 66.7
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 1.7e-37 160.2 107 69.2
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 1.7e-37 160.2 150 55.3
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 1.7e-37 160.2 101 75.2
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 1.7e-37 160.2 147 57.8
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 2.2e-37 159.8 107 68.2
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.2e-37 159.8 107 68.2
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.2e-37 159.8 107 68.2
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 2.2e-37 159.8 108 69.4
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 8.3e-37 157.9 164 53.7
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 8.3e-37 157.9 113 67.3
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 1.1e-36 157.5 169 53.3
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 1.4e-36 157.1 145 57.9
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 7.0e-36 154.8 169 52.7
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 1.2e-35 154.1 105 67.6
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.2e-35 154.1 146 56.8
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 2.7e-35 152.9 176 52.8
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 3.5e-35 152.5 111 66.7
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 3.5e-35 152.5 93 78.5
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 4.6e-35 152.1 86 82.6
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 6.0e-35 151.8 86 86.0
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 7.8e-35 151.4 119 60.5
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 1.0e-34 151.0 101 67.3
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 2.5e-33 146.4 85 82.4
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 1.2e-30 137.5 172 44.2
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 4.4e-30 135.6 165 44.8
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 4.4e-30 135.6 165 44.8
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 2.2e-29 133.3 84 73.8
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 4.1e-28 129.0 105 54.3
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.2e-24 117.5 168 43.5
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 3.5e-11 72.8 37 81.1


User provided reference genes

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