Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 2.2e-188 662.1 342 100.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 6.8e-161 570.9 321 92.5
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 2.5e-139 499.2 311 84.2
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.1e-126 457.2 316 77.2
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 9.6e-123 444.1 340 72.6
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.5e-107 392.9 312 69.2
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 1.6e-98 363.6 275 71.6
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 8.8e-92 341.3 311 60.8
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 1.2e-85 320.9 314 58.3
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 3.6e-85 319.3 311 59.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.4e-84 317.4 315 60.3
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 6.7e-84 315.1 315 59.4
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.0e-83 313.5 316 58.5
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 2.0e-80 303.5 329 55.6
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 5.9e-80 302.0 320 55.3
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.1e-78 297.7 319 51.7
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 4.2e-78 295.8 312 54.5
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.0e-76 291.2 326 52.8
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 8.8e-76 288.1 327 52.9
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 7.4e-75 285.0 327 53.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.7e-74 283.9 322 52.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 6.3e-74 282.0 319 51.7
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.1e-73 281.2 319 52.0
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.8e-73 280.4 310 51.9
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.8e-73 280.4 320 51.9
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.4e-73 280.0 315 51.4
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 2.4e-73 280.0 318 52.8
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.4e-73 280.0 321 51.7
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 2.4e-73 280.0 307 52.4
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.1e-73 279.6 321 51.7
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 5.3e-73 278.9 329 50.5
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 3.5e-72 276.2 371 45.8
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 4.5e-72 275.8 329 50.2
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 7.7e-72 275.0 313 52.1
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 4.2e-70 269.2 325 48.9
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.0e-68 264.6 337 47.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.4e-68 264.2 310 52.3
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.3e-68 263.5 302 52.0
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.3e-68 263.5 327 46.5
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 6.7e-68 261.9 331 47.1
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.0e-67 260.4 313 48.2
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 9.7e-67 258.1 316 49.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.3e-66 257.7 391 43.5
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 3.7e-66 256.1 325 47.4
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 6.3e-66 255.4 315 50.8
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.8e-65 253.8 370 44.3
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 3.1e-65 253.1 309 46.0
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 9.1e-65 251.5 317 48.9
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.2e-64 251.1 338 45.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.6e-64 250.8 316 47.2
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 1.6e-64 250.8 312 46.2
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 3.5e-64 249.6 318 46.2
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 4.5e-64 249.2 318 45.9
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.3e-63 247.7 319 45.8
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.1e-62 244.6 322 47.5
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 2.5e-62 243.4 322 45.7
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.2e-62 243.0 319 45.1
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 2.3e-60 236.9 316 44.9
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 4.0e-60 236.1 313 46.3
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.5e-59 234.2 308 44.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.0e-59 233.8 283 48.8
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.4e-57 227.6 253 51.4
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.8e-57 227.3 307 44.3
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.2e-56 224.6 298 46.6
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.9e-55 219.9 309 44.3
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 1.2e-53 214.5 312 45.8
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.2e-53 214.5 329 41.9
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-53 214.5 306 43.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.6e-53 214.2 279 49.1
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.6e-53 214.2 306 43.5
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 3.0e-52 209.9 259 49.4
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 5.2e-52 209.1 305 42.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.0e-51 207.2 273 45.8
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 3.4e-51 206.5 318 45.0
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 4.4e-51 206.1 256 48.8
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 3.7e-50 203.0 355 39.2
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.1e-49 199.9 201 55.7
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.0e-48 197.2 177 61.6
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.0e-47 194.9 188 59.0
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 7.3e-46 188.7 309 40.8
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.6e-45 187.6 286 42.3
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 3.6e-45 186.4 244 44.7
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.0e-44 184.9 277 41.5
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 2.3e-44 183.7 282 39.7
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.5e-43 181.0 254 43.7
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.0e-39 168.3 315 38.1
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 5.0e-39 166.0 365 32.1
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 5.6e-38 162.5 331 36.6
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.3e-36 157.1 176 50.0
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.7e-34 151.0 175 52.0
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 5.4e-33 146.0 181 47.5
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 9.2e-33 145.2 241 41.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.9e-30 137.5 88 75.0
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 1.9e-25 120.9 99 56.6
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 9.2e-25 118.6 82 70.7
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 3.0e-23 113.6 65 84.6
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 5.1e-23 112.8 253 33.6
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.6e-19 100.5 76 71.1
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.7e-18 97.8 158 39.2
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.9e-17 94.4 112 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 2.4e-17 94.0 358 25.1
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 3.0e-15 87.0 323 27.2
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 4.3e-14 83.2 392 24.7
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 2.4e-12 77.4 405 22.2
arahy.Tifrunner.gnm1.ann1.88RVSM Arachis hypogaea HOM05D034159 ORTHO05D008677 4.4e-11 73.2 89 44.9
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.3e-10 71.6 66 59.1
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 2.2e-10 70.9 41 82.9
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 1.4e-09 68.2 120 43.3
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 4.2e-09 66.6 45 66.7
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 5.4e-09 66.2 105 35.2
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 9.3e-09 65.5 119 36.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.2e-08 65.1 60 55.0
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 1.2e-08 65.1 44 65.9
arahy.Tifrunner.gnm1.ann1.GFC4NY Arachis hypogaea HOM05D001602 ORTHO05D001470 1.9e-06 57.8 77 46.8
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.5e-06 57.4 69 40.6


User provided reference genes

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