Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.8e-145 519.2 263 100.0
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 2.9e-127 458.8 263 89.0
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 8.5e-111 404.1 261 79.7
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 7.2e-110 401.0 263 78.7
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 1.4e-89 333.6 265 68.7
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 5.3e-89 331.6 263 67.3
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 7.0e-89 331.3 264 67.0
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 3.6e-85 318.9 265 64.2
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 2.6e-83 312.8 265 66.4
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 4.4e-83 312.0 263 65.0
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 4.0e-76 288.9 230 67.0
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 4.1e-57 225.7 264 51.5
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 2.7e-56 223.0 265 50.6
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.1e-54 217.6 270 47.8
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 5.6e-54 215.3 264 47.7
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 9.5e-54 214.5 264 46.2
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.6e-53 213.8 264 49.2
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 3.6e-53 212.6 267 47.6
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 3.1e-52 209.5 239 49.0
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 3.1e-52 209.5 267 45.3
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 6.8e-52 208.4 265 47.2
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.6e-51 206.5 271 50.2
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 9.8e-51 204.5 268 45.9
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 6.4e-50 201.8 267 46.1
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 1.9e-49 200.3 267 46.4
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 2.4e-49 199.9 266 46.6
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 4.1e-49 199.1 257 49.0
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 3.5e-48 196.1 270 47.4
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 1.5e-46 190.7 264 45.8
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 7.3e-46 188.3 258 43.4
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 8.9e-44 181.4 206 50.0
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 9.9e-43 177.9 228 45.6
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.3e-42 177.6 264 43.9
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.7e-42 177.2 269 42.8
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 6.4e-42 175.3 231 46.8
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 8.3e-42 174.9 263 41.4
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.1e-41 174.5 266 40.2
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.4e-41 174.1 262 42.0
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.4e-41 173.3 277 44.0
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 4.1e-41 172.6 262 42.4
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 5.4e-41 172.2 266 40.2
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 3.5e-40 169.5 262 41.6
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 3.0e-39 166.4 265 41.1
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 3.9e-39 166.0 271 39.5
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 5.1e-39 165.6 244 43.9
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 5.1e-39 165.6 271 38.7
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 8.6e-39 164.9 262 38.9
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.1e-38 164.5 260 42.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.1e-38 164.5 261 43.7
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 1.1e-38 164.5 264 42.0
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.5e-38 163.3 265 42.3
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.6e-38 162.2 260 42.3
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 9.5e-38 161.4 278 43.5
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 2.1e-37 160.2 259 41.7
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.7e-37 159.1 262 41.6
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 3.1e-36 156.4 273 36.6
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.0e-36 156.0 260 41.9
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 5.8e-35 152.1 263 36.9
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 2.9e-34 149.8 267 36.7
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 4.9e-34 149.1 267 38.2
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.2e-32 144.4 268 39.2
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.6e-32 144.1 279 36.6
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.3e-31 141.0 231 40.3
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 2.3e-31 140.2 228 38.6
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 1.5e-30 137.5 224 42.0
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.9e-30 137.1 289 36.0
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.3e-30 136.3 273 34.8
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 7.3e-30 135.2 290 37.2
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.2e-29 134.4 275 36.7
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.1e-29 133.7 272 34.9
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 4.7e-29 132.5 273 36.3
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 6.2e-29 132.1 227 36.6
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 8.1e-29 131.7 287 33.4
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.4e-28 131.0 210 40.0
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.8e-28 130.6 268 38.4
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 5.8e-27 125.6 278 35.3
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 2.2e-26 123.6 78 73.1
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 2.1e-24 117.1 267 36.0
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 3.5e-24 116.3 228 35.5
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.0e-23 114.8 216 39.4
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.7e-23 114.0 316 29.7
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.1e-22 111.3 128 49.2
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 1.1e-22 111.3 74 71.6
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 1.3e-21 107.8 83 61.4
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 8.1e-21 105.1 83 59.0
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 1.1e-20 104.8 83 59.0
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 1.4e-20 104.4 83 59.0
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 3.1e-20 103.2 235 34.9
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 4.0e-20 102.8 170 40.0
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 6.9e-20 102.1 83 56.6
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 4.9e-18 95.9 84 56.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 1.9e-17 94.0 86 53.5
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 2.4e-17 93.6 81 51.9
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 3.1e-12 76.6 246 28.0
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 4.0e-12 76.3 77 44.2
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 5.5e-09 65.9 81 43.2
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 1.5e-06 57.8 61 42.6
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 9.6e-06 55.1 86 38.4
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 9.6e-06 55.1 54 48.1


User provided reference genes

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