Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 2.4e-75 285.4 142 100.0
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 2.0e-50 202.6 142 71.1
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 4.8e-44 181.4 141 68.8
Glyma.03G204600 Glycine max HOM05D005113 ORTHO05D006045 5.0e-41 171.4 135 69.6
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 2.7e-39 165.6 144 61.8
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 1.1e-37 160.2 146 58.9
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 1.3e-36 156.8 149 59.7
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 3.8e-33 145.2 131 61.1
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 4.7e-31 138.3 139 54.0
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.8e-30 136.3 145 59.3
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 6.7e-30 134.4 131 59.5
VMungo1383G0003 Vigna mungo HOM05D005113 ORTHO05D006045 3.1e-27 125.6 142 54.2
Glyma.10G086500 Glycine max HOM05D005113 ORTHO05D006045 2.2e-25 119.4 143 50.3
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 4.4e-21 105.1 143 46.9
Phvul.007G265600 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 2.2e-20 102.8 139 45.3
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 9.1e-19 97.4 135 43.0
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 1.7e-17 93.2 109 47.7
arahy.Tifrunner.gnm1.ann1.I8YMJK Arachis hypogaea HOM05D005113 ORTHO05D006045 8.6e-17 90.9 135 47.4
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 8.6e-17 90.9 134 42.5
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 4.2e-16 88.6 135 43.0
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.1e-15 86.3 139 43.2
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 2.8e-15 85.9 136 41.2
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.8e-15 85.9 136 41.2
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 6.1e-15 84.7 127 41.7
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.1e-15 84.7 136 41.2
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 6.1e-15 84.7 136 41.2
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 8.0e-15 84.3 137 40.9
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 8.0e-15 84.3 132 40.9
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 8.0e-15 84.3 136 38.2
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 5.2e-14 81.6 135 43.0
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 2.0e-13 79.7 118 44.9
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 4.4e-13 78.6 144 35.4
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 5.7e-13 78.2 125 40.8
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 5.7e-13 78.2 131 38.2
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 7.5e-13 77.8 132 40.9
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 1.7e-12 76.6 83 54.2
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.7e-12 76.6 80 56.2
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 2.8e-12 75.9 131 40.5
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 3.7e-12 75.5 131 37.4
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 4.9e-12 75.1 133 39.8
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 6.3e-12 74.7 132 38.6
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 6.3e-12 74.7 131 39.7
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 1.1e-11 73.9 133 40.6
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 1.1e-11 73.9 137 38.7
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.1e-11 73.9 131 38.2
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 1.8e-11 73.2 139 36.7
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 1.8e-11 73.2 140 38.6
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 1.8e-11 73.2 131 34.4
Eucgr.A02548 Eucalyptus grandis HOM05D005113 ORTHO05D006045 2.4e-11 72.8 131 37.4
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 4.1e-11 72.0 141 32.6
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 4.1e-11 72.0 125 38.4
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 1.2e-10 70.5 131 36.6
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 1.2e-10 70.5 134 35.8
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 1.6e-10 70.1 133 37.6
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 2.7e-10 69.3 129 38.8
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 4.5e-10 68.6 132 38.6
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 5.9e-10 68.2 137 37.2
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 5.9e-10 68.2 128 35.9
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 5.9e-10 68.2 132 34.8
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 5.9e-10 68.2 131 38.2
Medtr0433s0010 Medicago truncatula HOM05D005113 ORTHO05D006045 7.8e-10 67.8 55 56.4
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 1.3e-09 67.0 134 35.8
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.7e-09 66.6 133 35.3
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.7e-09 66.6 133 35.3
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 3.8e-09 65.5 130 33.8
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 5.0e-09 65.1 129 39.5
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 8.6e-09 64.3 132 37.1
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 1.1e-08 63.9 134 32.8
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 1.5e-08 63.5 79 49.4
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 1.5e-08 63.5 131 35.9
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 1.5e-08 63.5 134 34.3
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 2.5e-08 62.8 90 45.6
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 2.5e-08 62.8 76 50.0
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 3.3e-08 62.4 138 36.2
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 5.6e-08 61.6 91 41.8
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 5.6e-08 61.6 138 33.3
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 7.3e-08 61.2 121 38.0
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 9.5e-08 60.8 128 36.7
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 9.5e-08 60.8 132 33.3
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 1.2e-07 60.5 136 34.6
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 1.6e-07 60.1 129 35.7
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 2.8e-07 59.3 129 36.4
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 4.7e-07 58.5 71 50.7
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 4.7e-07 58.5 80 43.8
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 6.1e-07 58.2 79 50.6
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 6.1e-07 58.2 69 49.3
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 6.1e-07 58.2 128 36.7
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 6.1e-07 58.2 73 45.2
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 1.0e-06 57.4 101 38.6
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.0e-06 57.4 135 32.6
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 3.0e-06 55.8 126 32.5
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 3.0e-06 55.8 134 32.8
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 3.0e-06 55.8 134 31.3
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 5.2e-06 55.1 79 46.8
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 5.2e-06 55.1 69 46.4
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 6.8e-06 54.7 73 47.9
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 6.8e-06 54.7 100 36.0
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 8.9e-06 54.3 79 45.6


User provided reference genes

Program Settings