Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G199100 Glycine max HOM05D003781 ORTHO05D004299 3.2e-198 694.9 348 100.0
Glyma.19G200100 Glycine max HOM05D003781 ORTHO05D004299 5.6e-187 657.5 331 99.4
Phvul.001G195300 Phaseolus vulgaris HOM05D003781 ORTHO05D004299 3.2e-134 482.3 325 75.7
VMungo0464G1804 Vigna mungo HOM05D003781 ORTHO05D004299 3.0e-132 475.7 321 76.3
VMungo1383G2961 Vigna mungo HOM05D003781 ORTHO05D004299 2.8e-130 469.2 319 74.3
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 4.4e-115 418.7 331 65.6
Lalb_Chr18g0056351 Lupinus albus HOM05D003781 ORTHO05D004299 3.3e-110 402.5 337 61.4
Medtr0036s0040 Medicago truncatula HOM05D003781 ORTHO05D004299 8.0e-109 397.9 334 64.1
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 4.0e-108 395.6 348 61.2
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 4.9e-106 388.7 344 60.8
Ca_03587_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 4.6e-104 382.1 334 62.0
Psat5g299360 Pisum sativum HOM05D003781 ORTHO05D004299 1.7e-103 380.2 336 61.3
Ca_17838_v3 Cicer arietinum L. HOM05D003781 ORTHO05D004299 3.9e-103 379.0 335 61.5
Medtr2g102470 Medicago truncatula HOM05D003781 ORTHO05D004299 1.6e-96 357.1 334 59.9
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 8.9e-92 341.3 350 53.1
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 2.0e-91 340.1 350 50.3
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 5.8e-91 338.6 356 53.4
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 5.8e-91 338.6 350 51.1
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 9.8e-91 337.8 358 52.2
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 8.3e-90 334.7 354 50.3
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 1.1e-89 334.3 354 50.3
TPR.G37223 Trifolium pratense HOM05D003781 ORTHO05D004299 1.9e-89 333.6 325 57.5
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 4.1e-89 332.4 351 51.3
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 7.1e-89 331.6 354 50.6
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 1.6e-88 330.5 361 51.5
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 3.5e-88 329.3 370 50.8
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 3.5e-88 329.3 370 50.8
Cpa.g.sc10.172 Carica papaya HOM05D003781 ORTHO05D004299 3.9e-87 325.9 355 50.1
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 6.6e-87 325.1 355 51.8
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 6.6e-87 325.1 358 50.6
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 8.6e-87 324.7 359 51.0
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 1.1e-86 324.3 355 51.8
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 1.1e-86 324.3 357 50.7
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 1.1e-86 324.3 349 48.4
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 1.9e-86 323.6 346 52.6
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.9e-86 323.6 357 50.4
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 2.5e-86 323.2 351 49.3
Manes.08G033100 Manihot esculenta HOM05D003781 ORTHO05D004299 2.5e-86 323.2 360 48.3
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 5.6e-86 322.0 356 48.6
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 1.2e-85 320.9 353 51.8
CANSAT01G0129 Cannabis sativa HOM05D003781 ORTHO05D004299 2.1e-85 320.1 362 47.8
Actinidia03891 Actinidia chinensis HOM05D003781 ORTHO05D004299 6.2e-85 318.5 354 51.4
Actinidia04001 Actinidia chinensis HOM05D003781 ORTHO05D004299 6.2e-85 318.5 354 51.4
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.1e-84 317.8 356 49.4
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 1.8e-84 317.0 357 50.1
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.8e-84 317.0 354 49.7
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 4.0e-84 315.8 358 49.7
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 1.2e-83 314.3 352 48.6
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.5e-83 313.9 352 48.6
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 3.4e-83 312.8 356 48.6
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 5.8e-83 312.0 368 46.5
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 9.9e-83 311.2 357 50.4
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 9.9e-83 311.2 368 47.3
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 1.3e-82 310.8 327 49.2
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 2.2e-82 310.1 337 49.6
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 4.9e-82 308.9 346 48.6
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 6.4e-82 308.5 347 48.7
HanXRQChr01g0025751 Helianthus annuus HOM05D003781 ORTHO05D004299 8.4e-82 308.1 340 50.0
vmacro07475 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 1.1e-81 307.8 356 50.0
EL10Ac5g12476 Beta vulgaris HOM05D003781 ORTHO05D004299 2.4e-81 306.6 356 49.2
Thhalv10027115m.g Eutrema salsugineum HOM05D003781 ORTHO05D004299 2.4e-81 306.6 336 47.9
THA.LOC104809956 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 2.4e-81 306.6 354 46.6
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 4.1e-81 305.8 357 48.5
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.2e-80 304.3 385 46.0
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 1.2e-80 304.3 385 46.0
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 1.2e-80 304.3 352 48.6
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.6e-80 303.9 266 57.5
AT4G31400 Arabidopsis thaliana HOM05D003781 ORTHO05D004299 2.7e-80 303.1 336 48.8
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 3.5e-80 302.8 388 45.6
Sp7g29260 Schrenkiella parvula HOM05D003781 ORTHO05D004299 4.6e-80 302.4 338 47.9
A08p18640 Brassica napus HOM05D003781 ORTHO05D004299 7.8e-80 301.6 334 48.2
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.3e-79 300.8 347 49.3
MBI04_g43653_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 5.1e-79 298.9 366 47.8
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 5.1e-79 298.9 347 47.8
C07p58580 Brassica napus HOM05D003781 ORTHO05D004299 8.6e-79 298.1 341 47.2
MBI04_g47396_MAGBIO Magnolia biondii HOM05D003781 ORTHO05D004299 1.1e-78 297.7 371 46.6
CARHR239280 Cardamine hirsuta HOM05D003781 ORTHO05D004299 2.5e-78 296.6 334 47.3
Aa31LG2G18950 Aethionema arabicum HOM05D003781 ORTHO05D004299 3.3e-78 296.2 333 46.8
A03p60680 Brassica napus HOM05D003781 ORTHO05D004299 3.3e-78 296.2 342 47.7
Carub.0007s0916 Capsella rubella HOM05D003781 ORTHO05D004299 5.6e-78 295.4 337 46.3
AUR62030753 Chenopodium quinoa HOM05D003781 ORTHO05D004299 5.6e-78 295.4 360 46.9
Sed0026509 Sechium edule HOM05D003781 ORTHO05D004299 7.3e-78 295.0 342 50.0
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 9.6e-78 294.7 316 54.1
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 9.6e-78 294.7 347 48.7
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 2.1e-77 293.5 351 47.0
DCAR_009179 Daucus carota HOM05D003781 ORTHO05D004299 2.1e-77 293.5 351 48.4
BraA08t33827Z Brassica rapa HOM05D003781 ORTHO05D004299 2.8e-77 293.1 337 47.2
Lsat_1_v5_gn_1_58161 Lactuca sativa HOM05D003781 ORTHO05D004299 2.8e-77 293.1 350 48.6
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 3.6e-77 292.7 269 55.4
BcaNung04576 Brassica carinata HOM05D003781 ORTHO05D004299 6.2e-77 292.0 341 47.2
BraA03t15109Z Brassica rapa HOM05D003781 ORTHO05D004299 2.4e-76 290.0 342 47.1
BolC7t46313H Brassica oleracea HOM05D003781 ORTHO05D004299 5.2e-76 288.9 342 46.8
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 1.2e-75 287.7 365 46.3
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 2.6e-75 286.6 266 56.4
Hma1.2p1_0381F.1_g140000 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 4.4e-75 285.8 279 52.0
Migut.J00706 Erythranthe guttata HOM05D003781 ORTHO05D004299 9.9e-75 284.6 341 46.0
MSTRG.5897 Avicennia marina HOM05D003781 ORTHO05D004299 1.3e-74 284.3 345 47.2
Lsat_1_v5_gn_6_113040 Lactuca sativa HOM05D003781 ORTHO05D004299 1.3e-74 284.3 274 54.4
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 2.2e-74 283.5 326 51.2
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 2.9e-74 283.1 358 44.7
Ah.04g152350 Amaranthus hybridus HOM05D003781 ORTHO05D000148 3.8e-74 282.7 348 46.6
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 6.4e-74 282.0 352 46.3
HanXRQChr16g0532941 Helianthus annuus HOM05D003781 ORTHO05D004299 1.4e-73 280.8 266 54.9
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 1.9e-73 280.4 354 46.9
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 2.4e-73 280.0 340 47.4
Aqoxy1G00670 Aquilegia oxysepala HOM05D003781 ORTHO05D004299 7.8e-72 275.0 355 44.8
Rhsim03G0064900 Rhododendron simsii HOM05D003781 ORTHO05D004299 1.3e-71 274.2 360 46.7
PSO675G8110 Papaver somniferum HOM05D003781 ORTHO05D004299 3.0e-71 273.1 351 47.0
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 3.0e-71 273.1 328 46.6
Oeu052621.2 Olea europaea HOM05D003781 ORTHO05D004299 5.1e-71 272.3 265 53.6
PSO541G6247 Papaver somniferum HOM05D003781 ORTHO05D004299 3.3e-70 269.6 351 46.4
AL7G20660 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 4.3e-70 269.2 295 49.2
C03p88000 Brassica napus HOM05D003781 ORTHO05D004299 7.3e-70 268.5 316 46.2
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 9.6e-70 268.1 279 52.3
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 9.6e-70 268.1 288 46.9
Lj2A35G43 Lonicera japonica HOM05D003781 ORTHO05D004299 9.6e-70 268.1 267 52.1
Oeu034092.2 Olea europaea HOM05D003781 ORTHO05D004299 9.6e-70 268.1 346 47.1
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 4.8e-69 265.8 263 52.5
Rhsim09G0141200 Rhododendron simsii HOM05D003781 ORTHO05D004299 7.6e-67 258.5 377 42.2
CDE08G1154 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 2.4e-65 253.4 277 48.4
SalBow8G0162 Salvia bowleyana HOM05D003781 ORTHO05D004299 3.2e-65 253.1 334 45.8
CDE06G0061 Ceratophyllum demersum HOM05D003781 ORTHO05D004299 2.1e-64 250.4 360 42.2
BolC3t21111H Brassica oleracea HOM05D003781 ORTHO05D004299 7.9e-64 248.4 317 45.7
unitig_26.g10109 Utricularia gibba HOM05D003781 ORTHO05D004299 1.3e-63 247.7 263 51.0
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 2.3e-63 246.9 325 44.0
BcaB03g12691 Brassica carinata HOM05D003781 ORTHO05D004299 3.9e-63 246.1 293 45.4
RhsimUnG0138100 Rhododendron simsii HOM05D003781 ORTHO05D004299 1.5e-62 244.2 342 45.0
Os04g0498900 Oryza sativa ssp. japonica HOM05D003781 ORTHO05D004299 3.6e-61 239.6 328 44.8
Zm00001eb078410 Zea mays HOM05D003781 ORTHO05D004299 1.2e-59 234.6 340 40.9
Gohir.A09G134500 Gossypium hirsutum HOM05D003781 ORTHO05D004299 9.9e-59 231.5 352 40.9
Zm00001eb078390 Zea mays HOM05D003781 ORTHO05D004299 6.4e-58 228.8 327 41.3
BcaC01g01091 Brassica carinata HOM05D003781 ORTHO05D004299 8.4e-58 228.4 277 44.8
Zm00001eb078400 Zea mays HOM05D003781 ORTHO05D004299 4.2e-57 226.1 327 41.0
vmacro10320 Vaccinium macrocarpon HOM05D003781 ORTHO05D004299 5.5e-57 225.7 245 47.3
ATR0772G111 Amborella trichopoda HOM05D003781 ORTHO05D004299 1.8e-55 220.7 307 41.0
HPP92_023079 Vanilla planifolia HOM05D003781 ORTHO05D004299 3.0e-55 219.9 352 38.6
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.6e-53 214.2 307 45.0
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 3.7e-53 213.0 240 48.8
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 1.2e-51 208.0 343 40.8
PSO675G6385 Papaver somniferum HOM05D003781 ORTHO05D004299 2.5e-49 200.3 275 43.3
BcaNung01523 Brassica carinata HOM05D003781 ORTHO05D004299 2.7e-48 196.8 287 41.1
SMO367G1200 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 1.1e-46 191.4 301 36.9
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 2.5e-46 190.3 229 45.0
SEGI_09697 Sequoiadendron giganteum HOM05D003781 ORTHO05D004299 2.5e-46 190.3 371 35.0
THA.LOC104816619 Tarenaya hassleriana HOM05D003781 ORTHO05D004299 3.3e-46 189.9 210 48.6
Cc02_g09440 Coffea canephora HOM05D003781 ORTHO05D004299 1.6e-45 187.6 258 43.4
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 2.4e-44 183.7 228 45.2
Pp3c11_11100 Physcomitrium patens HOM05D003781 ORTHO05D004299 6.5e-42 175.6 302 36.4
SMO343G0088 Selaginella moellendorffii HOM05D003781 ORTHO05D004299 8.7e-39 165.2 248 38.3
TPR.G33838 Trifolium pratense HOM05D003781 ORTHO05D004299 4.3e-38 162.9 160 57.5
RhsimUnG0138400 Rhododendron simsii HOM05D003781 ORTHO05D004299 1.6e-37 161.0 180 51.1
ATR1127G225 Amborella trichopoda HOM05D003781 ORTHO05D004299 3.1e-36 156.8 318 33.0
Sc07g0006420 Simmondsia chinensis HOM05D003781 ORTHO05D004299 3.6e-32 143.3 204 37.7
HanXRQChr15g0472861 Helianthus annuus HOM05D003781 ORTHO05D004299 1.8e-31 141.0 117 54.7
AagrBONN_evm.TU.Sc2ySwM_228.4048 Anthoceros agrestis HOM05D003781 ORTHO05D004299 4.4e-30 136.3 448 26.1
HanXRQChr03g0072391 Helianthus annuus HOM05D003781 ORTHO05D004299 6.3e-29 132.5 180 45.0
PRCOL_00001992 Prasinoderma coloniale HOM05D003781 ORTHO05D004299 1.9e-25 120.9 276 29.7
ATR0772G001 Amborella trichopoda HOM05D003781 ORTHO05D004299 2.5e-25 120.6 160 44.4
AL1G32760 Arabidopsis lyrata HOM05D003781 ORTHO05D004299 3.2e-25 120.2 143 46.2
Mapoly0033s0057 Marchantia polymorpha HOM05D003781 ORTHO05D004299 3.2e-25 120.2 157 41.4
Actinidia06046 Actinidia chinensis HOM05D003781 ORTHO05D004299 9.7e-22 108.6 148 43.9
SGA_v2.0_scaffold31G12848 Striga asiatica HOM05D003781 ORTHO05D004299 5.3e-20 102.8 192 39.1
MD10G1054000 Malus domestica HOM05D003781 ORTHO05D004299 1.6e-19 101.3 147 40.8
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 2.6e-19 100.5 216 33.8
Lsat_1_v5_gn_1_27721 Lactuca sativa HOM05D003781 ORTHO05D004299 1.6e-16 91.3 113 42.5
TPR.G742 Trifolium pratense HOM05D003781 ORTHO05D004299 2.1e-16 90.9 85 57.6
EL10Ac6g14086 Beta vulgaris HOM05D003781 ORTHO05D004299 3.6e-16 90.1 84 48.8
MCO12G060 Micromonas commoda HOM05D003781 ORTHO05D004299 4.0e-15 86.7 292 26.7
Gorai.005G179000 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.2e-14 85.1 55 61.8
Gohir.D04G105401 Gossypium hirsutum HOM05D003781 ORTHO05D004299 2.6e-14 84.0 55 61.8
TAR629G3109 Trochodendron aralioides HOM05D003781 ORTHO05D004299 5.7e-14 82.8 101 46.5
CBR_g53498 Chara braunii HOM05D003781 ORTHO05D004299 4.8e-13 79.7 77 53.2
CBR_g51231 Chara braunii HOM05D003781 ORTHO05D004299 2.9e-10 70.5 93 36.6
CBR_g53714 Chara braunii HOM05D003781 ORTHO05D004299 6.5e-10 69.3 146 30.8
SGA_v2.0_scaffold522G52710 Striga asiatica HOM05D003781 ORTHO05D004299 8.5e-10 68.9 114 35.1
VMungo0464G1762 Vigna mungo HOM05D000001 ORTHO05D001247 3.2e-09 67.0 49 71.4
Cfa022807 Carpinus fangiana HOM05D003781 ORTHO05D004299 1.2e-08 65.1 316 24.4
Cre12.g542400 Chlamydomonas reinhardtii HOM05D003781 ORTHO05D004299 2.1e-08 64.3 123 30.9
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 8.0e-08 62.4 55 54.5
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 6.8e-07 59.3 55 50.9
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 6.8e-07 59.3 55 50.9
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 8.8e-07 58.9 40 67.5
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 8.8e-07 58.9 55 50.9
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 8.8e-07 58.9 55 50.9
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 2.0e-06 57.8 55 49.1
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 3.4e-06 57.0 55 47.3
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 9.8e-06 55.5 49 55.1


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