Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 1.1e-84 316.6 160 100.0
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.5e-65 252.3 167 82.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 4.4e-62 241.5 165 77.6
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 2.9e-61 238.8 163 77.3
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 3.4e-54 215.3 176 67.6
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 3.9e-50 201.8 176 65.9
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 3.1e-47 192.2 184 62.0
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 2.6e-46 189.1 178 62.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 8.4e-45 184.1 117 82.9
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 5.4e-44 181.4 165 64.8
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.2e-43 180.3 157 68.8
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 6.0e-43 177.9 172 59.9
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.9e-41 172.9 146 65.8
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.5e-41 172.6 166 57.8
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 9.6e-41 170.6 160 60.0
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 1.6e-40 169.9 115 73.0
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 2.1e-40 169.5 119 73.9
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.1e-40 167.5 110 78.2
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 8.1e-40 167.5 113 74.3
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 8.1e-40 167.5 125 71.2
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-39 166.4 113 78.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.8e-39 166.4 113 78.8
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.4e-39 166.0 130 67.7
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 4.0e-39 165.2 104 80.8
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 4.0e-39 165.2 127 70.1
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 5.3e-39 164.9 108 75.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 9.0e-39 164.1 110 75.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 2.6e-38 162.5 125 70.4
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.4e-38 162.2 110 74.5
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.4e-38 162.2 110 74.5
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 4.4e-38 161.8 111 72.1
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.4e-38 161.8 110 73.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.4e-38 161.8 110 73.6
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 5.8e-38 161.4 106 78.3
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 9.9e-38 160.6 124 68.5
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.9e-38 160.6 110 73.6
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.3e-37 160.2 157 59.9
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.2e-37 159.5 113 71.7
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.2e-37 159.5 94 81.9
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 2.9e-37 159.1 118 71.2
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.9e-37 159.1 132 68.2
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 3.8e-37 158.7 145 58.6
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 3.8e-37 158.7 142 64.8
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 6.4e-37 157.9 150 62.7
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 6.4e-37 157.9 150 62.7
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 8.4e-37 157.5 93 81.7
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.1e-36 157.1 94 80.9
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.9e-36 156.4 122 66.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 2.4e-36 156.0 148 60.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 2.4e-36 156.0 94 84.0
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 2.4e-36 156.0 156 56.4
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 2.4e-36 156.0 102 78.4
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.4e-36 154.8 103 72.8
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 5.4e-36 154.8 102 75.5
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.2e-35 153.7 118 66.9
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.2e-35 153.7 94 78.7
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 1.6e-35 153.3 114 66.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.6e-35 153.3 103 72.8
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.1e-35 152.9 94 76.6
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.1e-35 152.9 93 77.4
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 2.7e-35 152.5 144 60.4
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 94 77.7
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 4.6e-35 151.8 94 77.7
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 6.0e-35 151.4 104 71.2
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 6.0e-35 151.4 104 71.2
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 7.8e-35 151.0 94 76.6
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 7.8e-35 151.0 104 70.2
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 7.8e-35 151.0 104 70.2
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.0e-34 150.6 92 78.3
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 1.3e-34 150.2 94 75.5
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.7e-34 149.8 127 63.0
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 2.3e-34 149.4 104 70.2
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 2.3e-34 149.4 137 57.7
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 3.9e-34 148.7 94 75.5
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 3.9e-34 148.7 135 59.3
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 5.1e-34 148.3 136 63.2
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 6.6e-34 147.9 105 69.5
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 6.6e-34 147.9 126 65.9
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.1e-33 147.1 109 66.1
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 2.5e-33 146.0 120 63.3
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 4.3e-33 145.2 123 63.4
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.6e-32 143.3 140 55.7
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 2.1e-32 142.9 93 75.3
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.2e-32 141.4 123 62.6
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.2e-32 141.4 117 63.2
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.3e-29 133.7 93 71.0
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.2e-28 129.0 120 60.0
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.2e-27 127.1 71 84.5
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 3.5e-27 125.6 80 73.8
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 4.6e-27 125.2 78 75.6
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.5e-25 120.2 142 50.7
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 2.1e-24 116.3 109 56.9
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 8.1e-24 114.4 64 84.4
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.4e-23 113.6 62 88.7
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 3.1e-23 112.5 63 85.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 3.1e-23 112.5 75 74.7
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 4.9e-21 105.1 58 82.8
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.1e-19 99.8 131 45.8
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 7.9e-19 97.8 70 68.6


User provided reference genes

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