Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 3.1e-107 391.7 185 100.0
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.4e-64 249.2 315 45.4
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.6e-63 246.5 315 44.4
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.5e-61 240.0 314 43.9
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 1.3e-60 236.9 306 43.8
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 9.0e-59 230.7 308 43.5
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 9.6e-53 210.7 298 39.6
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 2.8e-52 209.1 298 38.9
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 1.8e-51 206.5 298 39.6
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 5.3e-51 204.9 307 37.8
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 9.0e-51 204.1 308 38.3
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 1.7e-49 199.9 304 37.5
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 5.0e-49 198.4 311 37.6
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 1.4e-48 196.8 314 37.6
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 4.2e-48 195.3 281 37.0
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 2.1e-47 193.0 311 37.0
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 2.7e-47 192.6 306 36.6
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 4.6e-47 191.8 308 35.1
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 3.0e-46 189.1 303 35.0
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 3.0e-46 189.1 300 36.3
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 3.0e-46 189.1 306 36.6
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 6.7e-46 188.0 301 34.6
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 6.7e-46 188.0 304 34.9
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.9e-45 186.4 297 37.4
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 2.5e-45 186.0 308 36.0
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 4.3e-45 185.3 306 35.6
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 4.3e-45 185.3 306 35.3
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 9.7e-45 184.1 301 34.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.2e-44 183.0 313 34.5
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.2e-44 183.0 302 34.4
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 2.2e-44 183.0 307 35.2
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 3.7e-44 182.2 295 35.6
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 8.2e-44 181.0 312 34.9
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.1e-43 180.6 303 33.0
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.1e-43 180.6 309 34.6
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.4e-43 180.3 304 33.6
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.4e-43 180.3 298 36.2
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 1.4e-43 180.3 304 34.9
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 1.8e-43 179.9 314 35.4
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.8e-43 179.9 298 36.2
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 3.1e-43 179.1 297 35.0
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 3.1e-43 179.1 307 34.9
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 4.1e-43 178.7 305 33.8
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 6.9e-43 177.9 306 33.3
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 6.9e-43 177.9 306 34.6
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 9.1e-43 177.6 306 32.7
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.2e-42 177.2 306 32.4
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.5e-42 176.8 298 35.9
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 2.6e-42 176.0 295 34.6
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 2.6e-42 176.0 306 33.7
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 7.7e-42 174.5 307 33.9
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.3e-41 173.7 289 36.0
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 1.3e-41 173.7 315 34.9
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 5.0e-41 171.8 306 32.7
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 5.0e-41 171.8 113 73.5
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 8.5e-41 171.0 280 36.1
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 8.5e-41 171.0 298 32.6
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.4e-40 170.2 316 32.6
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.9e-40 169.9 267 39.7
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 4.2e-40 168.7 280 36.1
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.2e-39 167.2 289 35.3
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.6e-39 166.8 273 35.5
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.6e-39 166.8 295 33.9
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 4.6e-39 165.2 313 33.5
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.0e-38 164.1 294 31.6
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 3.0e-38 162.5 311 33.4
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 8.8e-38 161.0 113 67.3
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 2.0e-37 159.8 310 32.6
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 3.3e-37 159.1 286 35.7
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 9.7e-37 157.5 310 30.3
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.2e-36 156.4 278 33.5
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.8e-35 153.3 278 34.9
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.0e-34 149.8 269 31.6
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.0e-33 145.2 390 28.2
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 7.9e-31 137.9 306 29.7
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 3.9e-30 135.6 281 29.5
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 5.2e-30 135.2 331 29.3
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.5e-29 133.7 80 66.2
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.5e-29 133.7 80 66.2
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 2.0e-29 133.3 298 26.8
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 3.3e-29 132.5 442 24.7
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 5.7e-29 131.7 260 31.2
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 7.4e-29 131.3 96 60.4
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.7e-28 130.2 94 64.9
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 1.7e-28 130.2 257 32.7
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 2.2e-28 129.8 96 58.3
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.8e-28 129.4 86 65.1
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.8e-28 129.4 274 31.0
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 6.3e-28 128.3 77 70.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.8e-27 126.7 88 65.9
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 4.1e-27 125.6 120 53.3
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 5.3e-27 125.2 83 61.4
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.3e-27 125.2 77 67.5
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.6e-26 123.6 76 68.4
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.6e-26 123.6 76 69.7
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.6e-26 122.9 90 61.1
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 5.9e-26 121.7 77 67.5
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.3e-25 120.6 76 67.1
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 3.8e-25 119.0 76 65.8
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.8e-25 119.0 88 61.4
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 3.8e-25 119.0 261 28.0
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 4.2e-24 115.5 256 28.1
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 7.2e-24 114.8 97 54.6
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 1.6e-23 113.6 103 49.5
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.1e-23 113.2 281 26.3
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.8e-22 110.2 301 24.9
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.0e-22 109.0 95 52.6
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.7e-21 105.1 83 63.9
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 5.7e-21 105.1 223 29.1
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 6.3e-20 101.7 78 57.7
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 1.5e-16 90.5 61 67.2
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.4e-13 79.3 101 42.6
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 3.4e-13 79.3 61 59.0
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 5.9e-10 68.6 52 59.6
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.9e-09 66.2 65 56.9
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 1.1e-08 64.3 46 56.5
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 2.1e-07 60.1 97 36.1
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 2.8e-07 59.7 43 53.5
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 8.0e-07 58.2 62 51.6
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 8.0e-07 58.2 44 52.3


User provided reference genes

Program Settings