Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 5.3e-78 294.3 147 100.0
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 2.7e-66 255.4 145 84.8
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 2.5e-64 248.8 147 80.3
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 1.7e-60 236.1 148 79.7
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 1.9e-59 232.6 147 76.2
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 7.9e-58 227.3 146 78.1
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.7e-55 219.5 147 74.8
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 5.3e-54 214.5 147 76.9
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 4.5e-53 211.5 147 75.5
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 1.6e-50 203.0 154 66.9
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 1.4e-49 199.9 148 69.6
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 1.3e-47 193.4 154 65.6
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 2.8e-47 192.2 154 63.6
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 4.1e-46 188.3 153 64.7
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 5.3e-46 188.0 147 68.0
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 5.3e-46 188.0 150 62.7
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 2.0e-45 186.0 150 63.3
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 2.0e-45 186.0 151 64.9
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 7.7e-45 184.1 148 64.2
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 1.3e-44 183.3 150 62.0
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 2.9e-44 182.2 149 65.1
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 3.8e-44 181.8 148 64.9
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 3.8e-44 181.8 152 58.6
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 5.0e-44 181.4 146 62.3
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 4.2e-43 178.3 158 58.2
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 5.5e-43 177.9 154 61.0
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.2e-43 177.6 142 60.6
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 1.2e-42 176.8 154 59.1
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 1.2e-42 176.8 149 62.4
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 1.6e-42 176.4 151 57.0
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 2.1e-42 176.0 155 63.2
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.6e-42 175.3 151 57.0
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 3.9e-41 171.8 154 61.0
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 3.9e-41 171.8 150 59.3
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 3.9e-41 171.8 150 59.3
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 6.7e-41 171.0 153 58.2
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.8e-41 170.6 146 59.6
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 2.0e-40 169.5 152 56.6
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 4.8e-39 164.9 155 56.8
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 1.1e-38 163.7 158 58.2
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.4e-38 163.3 160 52.5
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 1.8e-38 162.9 149 60.4
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 4.1e-38 161.8 154 54.5
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 4.1e-38 161.8 154 57.1
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 5.3e-38 161.4 147 56.5
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.0e-38 161.0 154 55.8
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.0e-38 161.0 154 55.8
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 7.0e-38 161.0 142 57.7
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 1.2e-37 160.2 154 55.2
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.6e-37 159.8 148 60.1
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 2.6e-37 159.1 146 56.8
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 4.5e-37 158.3 143 57.3
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 5.9e-37 157.9 143 57.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 5.9e-37 157.9 154 55.2
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.9e-36 155.6 143 57.3
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 3.8e-36 155.2 145 55.9
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 8.5e-36 154.1 144 58.3
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.5e-35 153.3 107 70.1
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 1.9e-35 152.9 151 55.6
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 2.5e-35 152.5 145 51.7
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 2.5e-35 152.5 154 55.2
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 3.2e-35 152.1 153 56.9
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 4.2e-35 151.8 150 56.7
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 7.2e-35 151.0 151 55.6
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 9.4e-35 150.6 142 55.6
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 1.2e-34 150.2 144 55.6
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 2.1e-34 149.4 144 55.6
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 2.1e-34 149.4 149 57.0
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 2.7e-34 149.1 143 55.2
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 2.7e-34 149.1 144 54.9
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 2.7e-34 149.1 154 53.9
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 8.0e-34 147.5 144 54.9
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.8e-33 146.4 147 50.3
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 1.8e-33 146.4 150 54.7
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 2.3e-33 146.0 140 55.7
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 3.0e-33 145.6 157 51.6
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 4.0e-33 145.2 146 53.4
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 6.7e-33 144.4 146 54.8
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 6.7e-33 144.4 137 56.9
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 6.7e-33 144.4 151 55.0
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 8.8e-33 144.1 147 54.4
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 1.2e-32 143.7 146 54.1
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 1.2e-32 143.7 146 54.1
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 3.3e-32 142.1 143 55.2
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 5.7e-32 141.4 145 52.4
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 5.7e-32 141.4 151 51.7
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 7.5e-32 141.0 157 51.0
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 1.3e-31 140.2 149 53.0
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 2.8e-31 139.0 146 52.7
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 1.8e-30 136.3 135 54.8
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 4.1e-30 135.2 155 52.9
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 7.0e-30 134.4 138 50.0
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 1.2e-29 133.7 158 48.1
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.2e-29 133.7 102 61.8
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 4.5e-29 131.7 137 54.0
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 2.2e-28 129.4 138 51.4
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 3.8e-28 128.6 125 51.2
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 3.8e-28 128.6 119 56.3
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 8.5e-28 127.5 133 54.9
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 1.9e-27 126.3 104 55.8
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.5e-27 125.9 125 55.2
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 1.2e-26 123.6 130 50.0
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 2.1e-26 122.9 145 47.6
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 4.7e-26 121.7 130 53.8
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 6.1e-26 121.3 141 48.9
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.0e-25 120.6 155 48.4
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 1.0e-25 120.6 155 48.4
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.2e-24 117.1 139 48.9
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 2.6e-24 115.9 150 45.3
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 3.4e-24 115.5 144 44.4
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 8.3e-23 110.9 84 65.5
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 7.7e-21 104.4 101 54.5
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 3.8e-20 102.1 101 53.5
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.1e-19 100.5 101 52.5
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.1e-19 100.5 101 52.5
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 1.0e-17 94.0 134 41.8
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.0e-17 92.0 84 61.9
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.0e-17 92.0 84 61.9
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 6.8e-17 91.3 87 56.3
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 3.1e-14 82.4 70 51.4
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 1.7e-12 76.6 99 44.4
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 2.9e-12 75.9 144 34.7
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 4.7e-10 68.6 99 41.4
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 1.2e-08 63.9 80 45.0
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 4.4e-08 62.0 110 38.2
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 4.4e-08 62.0 66 56.1


User provided reference genes

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