Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G187300 Glycine max HOM05D007952 ORTHO05D004271 5.8e-52 207.2 100 100.0
Nitab4.5_0006096g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 1.0e-08 63.5 46 65.2
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 3.9e-08 61.6 31 93.5
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 8.7e-08 60.5 34 85.3
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 8.7e-08 60.5 34 85.3
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.1e-07 60.1 31 90.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.1e-07 60.1 31 90.3
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.1e-07 60.1 31 90.3
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 1.1e-07 60.1 31 90.3
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.5e-07 59.7 31 90.3
Nitab4.5_0008813g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 1.5e-07 59.7 31 87.1
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.9e-07 59.3 52 57.7
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.5e-07 58.9 85 44.7
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 3.3e-07 58.5 52 57.7
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 4.3e-07 58.2 31 87.1
Peaxi162Scf00475g00112 Petunia axillaris HOM05D007952 ORTHO05D004271 5.7e-07 57.8 31 80.6
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 7.4e-07 57.4 31 87.1
Peaxi162Scf00136g00086 Petunia axillaris HOM05D007952 ORTHO05D004271 9.6e-07 57.0 31 87.1
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 9.6e-07 57.0 31 87.1
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 1.3e-06 56.6 31 83.9
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 1.3e-06 56.6 31 83.9
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-06 55.8 31 83.9
Lsat_1_v5_gn_5_36201 Lactuca sativa HOM05D048309 ORTHO05D031508 4.8e-06 54.7 28 89.3
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 4.8e-06 54.7 28 89.3


User provided reference genes

Program Settings