Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 3.6e-67 258.1 125 100.0
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.6e-59 232.6 122 91.0
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 4.7e-59 231.1 122 90.2
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 4.1e-55 218.0 108 96.3
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 6.5e-53 210.7 122 79.5
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 1.1e-52 209.9 131 79.4
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 3.2e-52 208.4 123 77.2
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 4.2e-52 208.0 125 80.0
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.6e-51 206.1 125 79.2
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 2.6e-49 198.7 122 75.4
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 3.3e-49 198.4 125 76.8
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 4.4e-49 198.0 127 76.4
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 7.5e-49 197.2 124 75.0
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 7.5e-49 197.2 120 76.7
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 9.7e-49 196.8 127 75.6
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 9.7e-49 196.8 120 76.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.7e-48 196.1 119 74.8
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.1e-47 193.4 126 75.4
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.1e-47 193.4 122 73.8
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.8e-47 192.6 126 76.2
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 2.4e-47 192.2 122 73.0
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 5.3e-47 191.0 122 73.8
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 9.1e-47 190.3 123 74.0
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.6e-46 189.5 126 72.2
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 1.6e-46 189.5 126 72.2
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.0e-46 189.1 120 70.8
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 2.7e-46 188.7 122 71.3
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 2.7e-46 188.7 126 70.6
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 2.7e-46 188.7 126 72.2
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 3.5e-46 188.3 122 70.5
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.5e-46 188.3 135 68.1
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 3.5e-46 188.3 127 70.1
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 4.5e-46 188.0 123 69.1
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.9e-46 187.6 127 71.7
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 5.9e-46 187.6 127 71.7
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 2.9e-45 185.3 127 70.9
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 2.9e-45 185.3 127 70.9
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 2.9e-45 185.3 128 71.1
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 5.0e-45 184.5 125 71.2
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.5e-45 184.1 120 72.5
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 6.5e-45 184.1 127 68.5
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 1.9e-44 182.6 122 68.0
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 2.5e-44 182.2 125 67.2
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 2.5e-44 182.2 143 65.0
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 3.2e-44 181.8 123 67.5
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 4.2e-44 181.4 127 67.7
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 5.5e-44 181.0 122 71.3
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 5.5e-44 181.0 125 67.2
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.2e-44 180.6 126 68.3
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 9.4e-44 180.3 120 69.2
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 1.2e-43 179.9 129 69.0
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.1e-43 179.1 122 65.6
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.1e-43 179.1 122 65.6
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 2.1e-43 179.1 126 67.5
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.7e-43 178.7 126 66.7
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 3.6e-43 178.3 122 66.4
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 3.6e-43 178.3 124 66.9
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.6e-43 178.3 126 65.9
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.6e-43 178.3 126 66.7
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 4.7e-43 177.9 125 68.0
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 8.0e-43 177.2 122 65.6
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 8.0e-43 177.2 122 65.6
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 8.0e-43 177.2 105 76.2
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.0e-42 176.8 122 64.8
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.0e-42 176.8 122 64.8
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.0e-42 176.8 122 64.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 2.3e-42 175.6 122 63.9
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 3.0e-42 175.3 127 67.7
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 3.0e-42 175.3 125 63.2
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 3.0e-42 175.3 124 67.7
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.0e-42 175.3 122 63.9
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 4.0e-42 174.9 130 66.9
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 6.8e-42 174.1 120 66.7
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 8.8e-42 173.7 127 63.8
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 3.4e-41 171.8 124 63.7
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 5.7e-41 171.0 138 62.3
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 9.8e-41 170.2 168 56.5
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 3.7e-40 168.3 119 64.7
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 6.3e-40 167.5 127 63.8
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 2.4e-39 165.6 120 63.3
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 3.1e-39 165.2 119 63.9
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 5.4e-39 164.5 105 71.4
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.2e-38 163.3 125 64.0
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.0e-38 162.5 122 63.9
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 7.7e-38 160.6 127 62.2
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 5.0e-37 157.9 119 60.5
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.5e-37 157.5 103 70.9
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.8e-34 149.4 123 52.8
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 3.4e-33 145.2 114 57.9
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 9.8e-33 143.7 106 63.2
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 3.1e-31 138.7 97 64.9
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 1.6e-30 136.3 104 56.7
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.5e-30 135.2 106 60.4
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 5.9e-30 134.4 122 48.4
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.3e-29 133.3 122 48.4
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.3e-29 132.5 107 52.3
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 2.9e-29 132.1 124 57.3
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 3.3e-28 128.6 75 76.0
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.2e-27 126.7 81 66.7
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 2.8e-27 125.6 121 50.4
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 6.1e-27 124.4 81 70.4
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 4.0e-26 121.7 87 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.0e-25 119.4 127 46.5
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 2.0e-25 119.4 127 47.2
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 2.6e-25 119.0 77 72.7
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 3.4e-25 118.6 132 46.2
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 4.4e-25 118.2 106 52.8
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 4.4e-25 118.2 105 50.5
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 9.8e-25 117.1 79 64.6
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 1.4e-23 113.2 120 47.5
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 9.2e-23 110.5 122 50.8
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.0e-21 105.5 65 66.2
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 8.6e-21 104.0 120 50.0
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.9e-12 76.3 58 62.1
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 8.1e-11 70.9 46 69.6
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 8.1e-11 70.9 63 42.9
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 2.0e-09 66.2 50 66.0
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 6.4e-08 61.2 43 62.8
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 3.5e-06 55.5 39 61.5


User provided reference genes

Program Settings