Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G177767 Glycine max HOM05D003394 ORTHO05D046728 1.1e-51 206.5 110 100.0
Dinv35697 Davidia involucrata HOM05D003394 ORTHO05D004183 4.9e-28 127.9 83 85.5
RcHm_v2.0_Chr3g0468431 Rosa chinensis HOM05D003394 ORTHO05D004183 8.3e-28 127.1 83 85.5
Glyma.03G177100 Glycine max HOM05D003394 ORTHO05D004183 2.4e-27 125.6 83 86.7
FAN09G2519 Fragaria x ananassa HOM05D003394 ORTHO05D004183 3.2e-27 125.2 83 84.3
Hma1.2p1_0111F.1_g053750 Hydrangea macrophylla HOM05D003394 ORTHO05D004183 3.2e-27 125.2 83 83.1
MD12G1126400 Malus domestica HOM05D003394 ORTHO05D004183 3.2e-27 125.2 83 84.3
Oeu029424.1 Olea europaea HOM05D003394 ORTHO05D004183 3.2e-27 125.2 83 81.9
FvH4_6g15130 Fragaria vesca HOM05D003394 ORTHO05D004183 4.1e-27 124.8 83 84.3
FAN14G5170 Fragaria x ananassa HOM05D003394 ORTHO05D004183 4.1e-27 124.8 83 84.3
unitig_8.g4664 Utricularia gibba HOM05D003394 ORTHO05D004183 4.1e-27 124.8 83 81.9
Cpa.g.sc1.277 Carica papaya HOM05D003394 ORTHO05D004183 5.4e-27 124.4 83 81.9
Cpa.g.sc2216.1 Carica papaya HOM05D003394 ORTHO05D004183 5.4e-27 124.4 83 81.9
Duzib093G0661 Durio zibethinus HOM05D003394 ORTHO05D004183 7.1e-27 124.0 83 83.1
PGR142G1653 Punica granatum HOM05D003394 ORTHO05D004183 9.2e-27 123.6 83 83.1
QL07p045546 Quercus lobata HOM05D003394 ORTHO05D004183 2.1e-26 122.5 83 83.1
Glyma.10G048400 Glycine max HOM05D003394 ORTHO05D004183 3.5e-26 121.7 84 83.3
Glyma.13G136200 Glycine max HOM05D003394 ORTHO05D004183 6.0e-26 120.9 83 81.9
Migut.L01654 Erythranthe guttata HOM05D003394 ORTHO05D004183 3.9e-25 118.2 83 77.1
Atru.chr12.617 Acer truncatum HOM05D003394 ORTHO05D004183 5.1e-25 117.9 83 78.3
Actinidia38239 Actinidia chinensis HOM05D003394 ORTHO05D004183 1.1e-24 116.7 83 79.5
Atru.chr8.2539 Acer truncatum HOM05D003394 ORTHO05D004183 2.5e-24 115.5 83 78.3
Actinidia03017 Actinidia chinensis HOM05D003394 ORTHO05D057896 3.3e-24 115.2 83 78.3
Thecc.10G065500 Theobroma cacao HOM05D003394 ORTHO05D004183 7.3e-24 114.0 85 78.8
Hma1.2p1_0348F.1_g131920 Hydrangea macrophylla HOM05D003394 ORTHO05D004183 9.5e-24 113.6 83 77.1
Manes.09G070600 Manihot esculenta HOM05D003394 ORTHO05D004183 2.1e-23 112.5 85 77.6
PSO339G1296 Papaver somniferum HOM05D003394 ORTHO05D004183 2.8e-23 112.1 83 77.1
PSO384G0969 Papaver somniferum HOM05D003394 ORTHO05D004183 2.8e-23 112.1 83 77.1
HanXRQChr08g0219711 Helianthus annuus HOM05D003394 ORTHO05D004183 3.6e-23 111.7 83 77.1
Lsat_1_v5_gn_8_20961 Lactuca sativa HOM05D003394 ORTHO05D004183 3.6e-23 111.7 83 78.3
Thecc.05G052300 Theobroma cacao HOM05D003394 ORTHO05D004183 3.6e-23 111.7 83 77.1
Potri.016G084100 Populus trichocarpa HOM05D003394 ORTHO05D004183 4.7e-23 111.3 83 75.9
CsaV3_5G006370 Cucumis sativus L. HOM05D003394 ORTHO05D004183 8.1e-23 110.5 83 74.7
ECA233G1391 Erigeron canadensis HOM05D003394 ORTHO05D004183 8.1e-23 110.5 83 77.1
HanXRQChr12g0370391 Helianthus annuus HOM05D003394 ORTHO05D004183 1.4e-22 109.8 83 77.1
PGSC0003DMG400027902 Solanum tuberosum HOM05D003394 ORTHO05D004183 1.4e-22 109.8 83 74.7
HanXRQChr17g0559121 Helianthus annuus HOM05D003394 ORTHO05D046728 1.8e-22 109.4 81 75.3
HanXRQChr15g0496801 Helianthus annuus HOM05D003394 ORTHO05D004183 4.0e-22 108.2 83 77.1
CiPaw.02G177300 Carya illinoinensis HOM05D003394 ORTHO05D004183 1.5e-21 106.3 83 72.3
Migut.J00405 Erythranthe guttata HOM05D003394 ORTHO05D004183 1.5e-21 106.3 83 72.3
Manes.08G001802 Manihot esculenta HOM05D003394 ORTHO05D004183 1.5e-21 106.3 85 72.9
Duzib128G1992 Durio zibethinus HOM05D003394 ORTHO05D004183 2.0e-21 105.9 83 73.5
FvH4_7g20460 Fragaria vesca HOM05D003394 ORTHO05D004183 3.4e-21 105.1 82 72.0
DCAR_019147 Daucus carota HOM05D003394 ORTHO05D004183 5.8e-21 104.4 86 70.9
Nitab4.5_0000848g0130 Nicotiana tabacum HOM05D003394 ORTHO05D004183 1.3e-20 103.2 83 72.3
Nitab4.5_0006316g0020 Nicotiana tabacum HOM05D003394 ORTHO05D004183 1.3e-20 103.2 83 72.3
AL3G47810 Arabidopsis lyrata HOM05D003394 ORTHO05D004183 2.2e-20 102.4 83 69.9
AT2G20280 Arabidopsis thaliana HOM05D003394 ORTHO05D004183 2.2e-20 102.4 83 69.9
MBI14_g24892_MAGBIO Magnolia biondii HOM05D003394 ORTHO05D004183 2.2e-20 102.4 84 73.8
Zm00001eb148820 Zea mays HOM05D003394 ORTHO05D004183 3.8e-20 101.7 85 70.6
FAN03G2813 Fragaria x ananassa HOM05D003394 ORTHO05D004183 4.9e-20 101.3 82 70.7
FAN06G0926 Fragaria x ananassa HOM05D003394 ORTHO05D004183 4.9e-20 101.3 82 70.7
FAN06G2221 Fragaria x ananassa HOM05D003394 ORTHO05D004183 4.9e-20 101.3 82 70.7
C09p15140 Brassica napus HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
BolC9t54420H Brassica oleracea HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
BraA09t36921Z Brassica rapa HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
Carub.0003s3461 Capsella rubella HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
Thhalv10002021m.g Eutrema salsugineum HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
QL08p057203 Quercus lobata HOM05D003394 ORTHO05D004183 8.4e-20 100.5 84 70.2
Sp3g33510 Schrenkiella parvula HOM05D003394 ORTHO05D004183 8.4e-20 100.5 83 69.9
Os01g0834700 Oryza sativa ssp. japonica HOM05D003394 ORTHO05D004183 1.9e-19 99.4 85 69.4
SalBow4G2948 Salvia bowleyana HOM05D003394 ORTHO05D004183 2.4e-19 99.0 85 68.2
TWI15G1024 Tripterygium wilfordii HOM05D003394 ORTHO05D004183 2.4e-19 99.0 84 70.2
Potri.006G132800 Populus trichocarpa HOM05D003394 ORTHO05D004183 3.2e-19 98.6 83 69.9
GSVIVG01016357001 Vitis vinifera HOM05D003394 ORTHO05D004183 4.1e-19 98.2 83 69.9
PGR004G2225 Punica granatum HOM05D003394 ORTHO05D004183 1.2e-18 96.7 84 70.2
Cc06_g03410 Coffea canephora HOM05D003394 ORTHO05D004183 4.6e-18 94.7 83 67.5
FAN01G1405 Fragaria x ananassa HOM05D003394 ORTHO05D004183 7.8e-18 94.0 82 67.1
RcHm_v2.0_Chr1g0364371 Rosa chinensis HOM05D003394 ORTHO05D004183 7.8e-18 94.0 82 67.1
SalBow3G4124 Salvia bowleyana HOM05D003394 ORTHO05D004183 1.0e-17 93.6 83 67.5
A07p00440 Brassica napus HOM05D003394 ORTHO05D004183 1.3e-17 93.2 83 65.1
Ciclev10012046m.g Citrus clementina HOM05D003394 ORTHO05D004183 1.3e-17 93.2 83 68.7
CANSAT56G1215 Cannabis sativa HOM05D003394 ORTHO05D004183 1.7e-17 92.8 83 66.3
CiPaw.09G181800 Carya illinoinensis HOM05D003394 ORTHO05D004183 1.7e-17 92.8 90 58.9
MSTRG.26735 Avicennia marina HOM05D003394 ORTHO05D004183 2.3e-17 92.4 83 66.3
BraA09t41282Z Brassica rapa HOM05D003394 ORTHO05D004183 2.3e-17 92.4 83 66.3
MD04G1114100 Malus domestica HOM05D003394 ORTHO05D004183 2.3e-17 92.4 83 67.5
TAR636G1733 Trochodendron aralioides HOM05D003394 ORTHO05D004183 2.3e-17 92.4 83 67.5
CDE02G0377 Ceratophyllum demersum HOM05D003394 ORTHO05D004183 3.9e-17 91.7 83 65.1
HPP92_001029 Vanilla planifolia HOM05D003394 ORTHO05D004183 5.1e-17 91.3 83 63.9
CARHR110770 Cardamine hirsuta HOM05D003394 ORTHO05D004183 6.6e-17 90.9 83 65.1
Mapoly0100s0024 Marchantia polymorpha HOM05D003394 ORTHO05D004183 1.9e-16 89.4 83 63.9
Pp3c6_18260 Physcomitrium patens HOM05D003394 ORTHO05D004183 1.9e-16 89.4 85 63.5
BcaB03g16817 Brassica carinata HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BcaB08g34902 Brassica carinata HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BcaC06g36708 Brassica carinata HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BcaC07g41222 Brassica carinata HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BcaNung04098 Brassica carinata HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
A09p12770 Brassica napus HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
C07p00860 Brassica napus HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BolC7t40525H Brassica oleracea HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
BolC8t51787H Brassica oleracea HOM05D003394 ORTHO05D004183 2.5e-16 89.0 83 63.9
Aqoxy4G03149 Aquilegia oxysepala HOM05D003394 ORTHO05D004183 3.3e-16 88.6 83 63.9
AagrBONN_evm.TU.Sc2ySwM_344.1346 Anthoceros agrestis HOM05D003394 ORTHO05D004183 5.6e-16 87.8 83 60.2
COL.COLO4_27101 Corchorus olitorius HOM05D003394 ORTHO05D004183 7.3e-16 87.4 59 79.7
Oeu060080.1 Olea europaea HOM05D003394 ORTHO05D287472 9.6e-16 87.0 59 79.7
Pp3c25_2690 Physcomitrium patens HOM05D003394 ORTHO05D004183 1.2e-15 86.7 84 63.1
Dinv31373 Davidia involucrata HOM05D003394 ORTHO05D004183 2.8e-15 85.5 83 62.7
ATR0594G173 Amborella trichopoda HOM05D003394 ORTHO05D004183 3.6e-15 85.1 83 65.1
SMO358G0089 Selaginella moellendorffii HOM05D003394 ORTHO05D004183 4.7e-15 84.7 93 54.8
CBR_g30214 Chara braunii HOM05D003394 ORTHO05D004183 8.1e-15 84.0 96 54.2
CDE09G0715 Ceratophyllum demersum HOM05D003394 ORTHO05D004183 1.1e-14 83.6 83 60.2
Rhsim03G0141300 Rhododendron simsii HOM05D003394 ORTHO05D004183 2.4e-14 82.4 83 62.7
Duzib128G0237 Durio zibethinus HOM05D003394 ORTHO05D004183 3.1e-14 82.0 85 61.2
FAN10G3966 Fragaria x ananassa HOM05D003394 ORTHO05D004183 3.1e-14 82.0 95 54.7
DCAR_009274 Daucus carota HOM05D003394 ORTHO05D004183 1.5e-13 79.7 83 59.0
BraA07t27835Z Brassica rapa HOM05D003394 ORTHO05D004183 7.6e-13 77.4 83 56.6
CSS0040010 Camellia sinensis var. sinensis HOM05D003394 ORTHO05D004183 9.9e-13 77.0 83 57.8
THA.LOC104799363 Tarenaya hassleriana HOM05D003394 ORTHO05D004183 1.3e-12 76.6 83 55.4
Lj8A94G44 Lonicera japonica HOM05D003394 ORTHO05D004183 1.7e-12 76.3 82 59.8
Eucgr.G02789 Eucalyptus grandis HOM05D003394 ORTHO05D004183 2.2e-12 75.9 83 57.8
Solyc09g007230.3 Solanum lycopersicum HOM05D003394 ORTHO05D004183 2.2e-12 75.9 83 56.6
Sopen09g002100 Solanum pennellii HOM05D003394 ORTHO05D004183 2.2e-12 75.9 83 56.6
MELO3C011721.2 Cucumis melo HOM05D003394 ORTHO05D004183 2.9e-12 75.5 83 57.8
arahy.Tifrunner.gnm1.ann1.TFIN41 Arachis hypogaea HOM05D003394 ORTHO05D004183 4.9e-12 74.7 83 59.0
arahy.Tifrunner.gnm1.ann1.V9C9EC Arachis hypogaea HOM05D003394 ORTHO05D004183 4.9e-12 74.7 83 59.0
Gohir.A01G217900 Gossypium hirsutum HOM05D003394 ORTHO05D004183 4.9e-12 74.7 83 57.8
Actinidia05277 Actinidia chinensis HOM05D003394 ORTHO05D004183 6.4e-12 74.3 83 57.8
TAR633G2643 Trochodendron aralioides HOM05D003394 ORTHO05D004183 6.4e-12 74.3 83 56.6
A09p58950 Brassica napus HOM05D003394 ORTHO05D004183 1.1e-11 73.6 79 58.2
ClCG02G013800 Citrullus lanatus HOM05D003394 ORTHO05D004183 1.4e-11 73.2 83 56.6
COL.COLO4_23774 Corchorus olitorius HOM05D003394 ORTHO05D004183 1.4e-11 73.2 64 67.2
Gohir.D01G206800 Gossypium hirsutum HOM05D003394 ORTHO05D004183 1.4e-11 73.2 83 57.8
Gorai.002G251700 Gossypium raimondii HOM05D003394 ORTHO05D004183 1.4e-11 73.2 83 57.8
Hund20140 Selenicereus undatus HOM05D003394 ORTHO05D004183 2.4e-11 72.4 83 56.6
Lsat_1_v5_gn_9_66560 Lactuca sativa HOM05D003394 ORTHO05D004183 4.2e-11 71.6 83 59.0
CSS0037704 Camellia sinensis var. sinensis HOM05D003394 ORTHO05D004183 5.4e-11 71.2 83 56.6
Duzib114G0225 Durio zibethinus HOM05D003394 ORTHO05D004183 5.4e-11 71.2 85 56.5
Ciclev10031903m.g Citrus clementina HOM05D003394 ORTHO05D004183 7.1e-11 70.9 83 54.2
Lj5g0004676 Lotus japonicus HOM05D003394 ORTHO05D004183 9.3e-11 70.5 82 56.1
Sabra06G0104300 Salix brachista HOM05D003394 ORTHO05D004183 1.2e-10 70.1 57 68.4
Lalb_Chr21g0314591 Lupinus albus HOM05D003394 ORTHO05D004183 2.1e-10 69.3 83 57.8
Haze_20669 Corylus avellana HOM05D003394 ORTHO05D004183 2.7e-10 68.9 83 56.6
Medtr1g067020 Medicago truncatula HOM05D003394 ORTHO05D004183 2.7e-10 68.9 82 56.1
Haze_16950 Corylus avellana HOM05D003394 ORTHO05D004183 3.5e-10 68.6 82 52.4
C08p42270 Brassica napus HOM05D003394 ORTHO05D004183 6.0e-10 67.8 75 56.0
Sed0009252 Sechium edule HOM05D003394 ORTHO05D004183 7.8e-10 67.4 82 54.9
CiPaw.01G277700 Carya illinoinensis HOM05D003394 ORTHO05D004183 1.3e-09 66.6 82 53.7
Psat0ss6317g0120 Pisum sativum HOM05D003394 ORTHO05D004183 1.3e-09 66.6 82 54.9
Potri.008G045600 Populus trichocarpa HOM05D003394 ORTHO05D004183 1.3e-09 66.6 83 54.2
TPR.G35662 Trifolium pratense HOM05D003394 ORTHO05D004183 1.3e-09 66.6 82 54.9
Lalb_Chr02g0153591 Lupinus albus HOM05D003394 ORTHO05D004183 1.7e-09 66.2 83 54.2
Lalb_Chr25g0288441 Lupinus albus HOM05D003394 ORTHO05D004183 1.7e-09 66.2 83 54.2
EL10Ac7g17330 Beta vulgaris HOM05D003394 ORTHO05D004183 5.1e-09 64.7 82 50.0
Dinv37240 Davidia involucrata HOM05D003394 ORTHO05D004183 5.1e-09 64.7 43 79.1
Gohir.A05G343800 Gossypium hirsutum HOM05D003394 ORTHO05D004183 5.1e-09 64.7 85 52.9
Gohir.D04G082200 Gossypium hirsutum HOM05D003394 ORTHO05D004183 5.1e-09 64.7 85 52.9
Gorai.012G092900 Gossypium raimondii HOM05D003394 ORTHO05D004183 5.1e-09 64.7 85 52.9
MD01G1113600 Malus domestica HOM05D003394 ORTHO05D004183 6.6e-09 64.3 82 53.7
ECA232G1617 Erigeron canadensis HOM05D003394 ORTHO05D004183 1.5e-08 63.2 83 53.0
Sc01g0003650 Simmondsia chinensis HOM05D003394 ORTHO05D004183 1.5e-08 63.2 83 50.6
Aa31LG8G17270 Aethionema arabicum HOM05D003394 ORTHO05D004183 1.9e-08 62.8 83 53.0
Peaxi162Scf00005g05117 Petunia axillaris HOM05D003394 ORTHO05D004183 1.9e-08 62.8 83 51.8
SGA_v2.0_scaffold35G14175 Striga asiatica HOM05D003394 ORTHO05D004183 1.9e-08 62.8 83 50.6
VMungo0720G1327 Vigna mungo HOM05D003394 ORTHO05D004183 2.5e-08 62.4 83 53.0
Prupe.6G243000 Prunus persica HOM05D003394 ORTHO05D004183 4.3e-08 61.6 83 51.8
vmacro07093 Vaccinium macrocarpon HOM05D003394 ORTHO05D004183 5.6e-08 61.2 83 50.6
Cre01.g014050 Chlamydomonas reinhardtii HOM05D003394 ORTHO05D004183 9.6e-08 60.5 85 50.6
Ah.08g211990 Amaranthus hybridus HOM05D003394 ORTHO05D004183 1.6e-07 59.7 83 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1347 Anthoceros agrestis HOM05D003394 ORTHO05D004183 2.8e-07 58.9 79 45.6
Ca_02310_v3 Cicer arietinum L. HOM05D003394 ORTHO05D004183 3.6e-07 58.5 32 87.5
SGA_v2.0_scaffold94G28659 Striga asiatica HOM05D003394 ORTHO05D004183 8.1e-07 57.4 83 48.2
Prupe.2G220500 Prunus persica HOM05D003394 ORTHO05D004183 1.1e-06 57.0 82 51.2
SEGI_02269 Sequoiadendron giganteum HOM05D003394 ORTHO05D004183 1.4e-06 56.6 82 48.8
Phvul.007G162750 Phaseolus vulgaris HOM05D003394 ORTHO05D004183 2.4e-06 55.8 83 50.6
MD07G1181600 Malus domestica HOM05D003394 ORTHO05D004183 3.1e-06 55.5 82 51.2
Lj3C977T6 Lonicera japonica HOM05D003394 ORTHO05D004183 5.3e-06 54.7 82 47.6
AUR62040529 Chenopodium quinoa HOM05D003394 ORTHO05D004183 6.9e-06 54.3 84 50.0
AUR62042915 Chenopodium quinoa HOM05D003394 ORTHO05D004183 6.9e-06 54.3 84 50.0


User provided reference genes

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