Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 3.7e-94 348.2 178 100.0
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 7.0e-85 317.4 180 91.7
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.1e-69 266.9 178 80.3
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 2.2e-62 242.7 178 74.7
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.7e-49 198.7 189 63.5
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 5.3e-48 194.9 189 63.0
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 2.0e-47 193.0 194 63.4
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 9.9e-47 190.7 189 62.4
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 2.1e-44 183.0 196 61.7
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.3e-41 173.7 192 59.9
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 1.1e-32 144.1 183 51.9
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 3.4e-31 139.0 195 48.7
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 3.4e-23 112.5 201 43.8
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 4.5e-23 112.1 192 43.8
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.7e-22 110.2 195 43.6
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.7e-22 110.2 186 41.9
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 2.2e-22 109.8 197 43.7
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.2e-22 109.8 193 46.1
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.5e-22 108.2 188 42.0
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 8.5e-22 107.8 190 43.7
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.5e-22 107.8 204 44.1
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.4e-21 107.1 187 41.2
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.4e-21 107.1 190 44.2
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.4e-21 107.1 190 44.2
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 1.9e-21 106.7 197 42.1
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 3.2e-21 105.9 190 42.6
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.5e-21 105.1 190 43.7
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 9.4e-21 104.4 210 42.9
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 9.4e-21 104.4 190 44.7
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 1.2e-20 104.0 185 41.1
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 6.1e-20 101.7 199 42.2
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 7.9e-20 101.3 179 42.5
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.4e-19 100.5 178 44.4
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.3e-19 99.8 211 42.2
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 3.0e-19 99.4 175 44.6
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 3.9e-19 99.0 204 43.1
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.0e-18 96.7 172 43.6
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 5.7e-18 95.1 197 39.6
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.7e-18 95.1 181 39.2
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 3.7e-17 92.4 198 37.9
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.3e-17 91.7 188 41.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.1e-16 90.9 184 40.8
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 3.1e-16 89.4 195 40.0
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 5.3e-16 88.6 197 38.6
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.2e-15 87.4 190 37.9
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 2.9e-14 82.8 187 35.3
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 5.0e-14 82.0 183 38.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 1.8e-11 73.6 115 43.5
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 6.7e-11 71.6 159 35.8
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.0e-10 70.1 181 35.4
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 2.6e-10 69.7 172 37.2
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 5.7e-10 68.6 200 33.5
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 5.7e-10 68.6 194 33.5
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 9.7e-10 67.8 135 37.0
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 1.7e-09 67.0 172 35.5
EL10Ac3g05005 Beta vulgaris HOM05D007526 ORTHO05D009350 4.8e-09 65.5 206 31.1
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 4.8e-09 65.5 194 33.5
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 8.2e-09 64.7 190 30.0
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 1.1e-08 64.3 184 31.5
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 1.4e-08 63.9 190 35.3
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 7.0e-08 61.6 44 72.7
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.6e-07 60.5 183 35.0
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.6e-07 60.5 173 31.2
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.0e-07 60.1 177 37.3
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 2.6e-07 59.7 214 33.6
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 3.5e-07 59.3 198 32.8
AL3G53510 Arabidopsis lyrata HOM05D013395 ORTHO05D015261 5.9e-07 58.5 177 33.9
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 5.9e-07 58.5 200 31.5
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 5.9e-07 58.5 166 33.7
FvH4_4g03670 Fragaria vesca HOM05D007526 ORTHO05D009350 7.7e-07 58.2 192 32.8
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 7.7e-07 58.2 204 29.4
FAN12G2381 Fragaria x ananassa HOM05D007526 ORTHO05D009350 1.0e-06 57.8 192 32.8
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.3e-06 57.4 176 34.1
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 1.7e-06 57.0 191 29.8
PGR004G2347 Punica granatum HOM05D007526 ORTHO05D009350 1.7e-06 57.0 186 29.0
AT2G20500 Arabidopsis thaliana HOM05D013395 ORTHO05D015261 2.2e-06 56.6 170 31.8
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 2.2e-06 56.6 196 30.1
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 2.9e-06 56.2 170 31.8
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 2.9e-06 56.2 173 32.9
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 3.8e-06 55.8 219 31.1
Ah.04g155760 Amaranthus hybridus HOM05D007526 ORTHO05D009350 5.0e-06 55.5 201 28.9
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 5.0e-06 55.5 191 33.5
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 8.5e-06 54.7 189 29.6
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 8.5e-06 54.7 195 34.4


User provided reference genes

Program Settings