Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 1.0e-94 350.1 183 100.0
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 2.6e-82 308.9 183 88.5
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 4.4e-74 281.6 183 82.5
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.2e-68 263.5 177 79.7
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 3.9e-62 241.9 186 71.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 6.2e-60 234.6 184 67.9
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 1.1e-59 233.8 186 68.8
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.3e-57 226.9 192 66.1
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 6.4e-57 224.6 174 70.7
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 4.1e-56 221.9 184 67.9
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 7.8e-55 217.6 188 62.2
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 7.8e-55 217.6 187 64.7
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 3.0e-54 215.7 142 74.6
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 3.9e-54 215.3 189 61.4
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 5.1e-54 214.9 146 75.3
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 1.9e-53 213.0 148 72.3
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 5.6e-53 211.5 175 62.9
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 9.5e-53 210.7 188 59.6
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 2.8e-52 209.1 177 60.5
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.4e-51 206.8 177 61.0
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 2.4e-51 206.1 166 64.5
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 4.0e-51 205.3 148 70.3
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 5.2e-51 204.9 166 65.7
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.2e-50 203.8 185 62.2
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.4e-50 201.8 166 63.3
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 5.8e-50 201.4 195 59.0
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 5.8e-50 201.4 145 72.4
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 9.9e-50 200.7 144 68.8
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 9.9e-50 200.7 166 62.0
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 9.9e-50 200.7 166 63.9
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.7e-49 199.9 137 73.7
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.7e-49 199.9 137 73.7
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 3.8e-49 198.7 137 71.5
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 8.4e-49 197.6 149 65.8
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.4e-48 196.8 137 71.5
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 2.4e-48 196.1 176 59.1
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.4e-48 196.1 176 59.1
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.4e-48 196.1 176 59.1
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.4e-48 196.1 176 59.1
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.2e-48 195.7 177 58.8
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 3.2e-48 195.7 176 60.8
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 4.1e-48 195.3 179 60.3
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 5.4e-48 194.9 132 72.0
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.1e-48 194.5 177 58.2
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.6e-47 193.4 177 58.2
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 2.7e-47 192.6 193 58.0
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 4.6e-47 191.8 176 58.5
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 4.6e-47 191.8 174 58.0
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 6.0e-47 191.4 148 64.9
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 6.0e-47 191.4 144 65.3
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.0e-46 190.7 139 68.3
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 1.7e-46 189.9 148 64.2
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 3.0e-46 189.1 148 64.9
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 5.1e-46 188.3 146 65.1
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 5.1e-46 188.3 145 64.1
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 8.7e-46 187.6 144 63.2
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 1.1e-45 187.2 148 64.2
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.9e-45 186.4 166 58.4
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 2.5e-45 186.0 140 67.9
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 5.6e-45 184.9 129 80.6
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 5.6e-45 184.9 137 67.9
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 7.3e-45 184.5 157 60.5
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 7.3e-45 184.5 140 67.9
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 7.3e-45 184.5 158 60.8
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 7.3e-45 184.5 158 60.8
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 7.3e-45 184.5 140 67.9
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 7.3e-45 184.5 173 57.2
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 9.6e-45 184.1 140 67.9
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 9.6e-45 184.1 140 67.9
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.2e-44 183.7 140 66.4
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.2e-44 183.7 124 73.4
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.2e-44 183.7 158 60.8
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 1.6e-44 183.3 140 67.1
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.6e-44 183.3 138 67.4
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.6e-44 183.3 148 64.2
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 2.1e-44 183.0 175 57.7
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 4.7e-44 181.8 138 67.4
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 6.2e-44 181.4 119 73.1
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 6.2e-44 181.4 137 68.6
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 8.1e-44 181.0 141 66.7
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 8.1e-44 181.0 175 58.9
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.1e-43 180.6 183 55.7
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 1.1e-43 180.6 155 60.6
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.4e-43 180.3 146 62.3
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.4e-43 179.5 183 55.7
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 3.1e-43 179.1 144 66.7
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 3.1e-43 179.1 135 67.4
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 4.0e-43 178.7 185 54.6
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 5.2e-43 178.3 148 61.5
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.5e-42 176.8 130 73.1
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 2.0e-42 176.4 129 72.9
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.4e-42 175.6 144 61.1
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 9.9e-42 174.1 146 60.3
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 9.9e-42 174.1 173 55.5
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 1.3e-41 173.7 141 64.5
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.3e-41 173.7 144 60.4
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 2.2e-41 172.9 150 58.7
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 8.4e-41 171.0 137 62.0
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 5.4e-40 168.3 135 65.9
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 2.7e-39 166.0 182 52.2
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 1.7e-38 163.3 145 60.0
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 3.0e-38 162.5 121 70.2
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.0e-38 162.5 129 65.9
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 6.6e-38 161.4 144 60.4
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 4.3e-37 158.7 122 65.6
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 4.8e-36 155.2 87 86.2
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 3.1e-35 152.5 123 62.6
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.5e-34 150.2 137 58.4
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.6e-34 149.4 119 65.5
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.7e-33 146.7 124 62.1
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 6.4e-33 144.8 129 58.1
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 3.2e-32 142.5 100 70.0
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 6.7e-30 134.8 102 68.6
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 8.7e-30 134.4 129 55.0
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.9e-29 133.3 114 57.0
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 5.6e-29 131.7 134 50.7
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.7e-25 120.2 127 44.1
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.9e-24 116.7 148 41.9
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 5.8e-18 95.1 123 43.9
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.6e-15 87.0 78 61.5
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.0e-14 84.3 103 46.6
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.3e-14 83.2 68 61.8
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.6e-10 69.7 61 57.4
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 3.0e-06 56.2 81 39.5


User provided reference genes

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