Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G154300 Glycine max HOM05D005179 ORTHO05D006225 1.2e-75 286.6 156 100.0
Phvul.001G149300 Phaseolus vulgaris HOM05D005179 ORTHO05D006225 5.6e-54 214.5 156 78.2
Glyma.03G151700 Glycine max HOM05D005179 ORTHO05D006225 1.6e-53 213.0 156 80.8
VMungo1383G3409 Vigna mungo HOM05D005179 ORTHO05D006225 2.9e-42 175.6 156 67.3
Medtr7g094650 Medicago truncatula HOM05D005179 ORTHO05D006225 5.5e-41 171.4 174 62.6
Ca_08572_v3 Cicer arietinum L. HOM05D005179 ORTHO05D006225 5.1e-39 164.9 167 58.7
Lj5g0012316 Lotus japonicus HOM05D005179 ORTHO05D006225 1.1e-36 157.1 158 60.1
Lj1g0021337 Lotus japonicus HOM05D005179 ORTHO05D006225 1.2e-35 153.7 154 64.3
Lalb_Chr21g0306521 Lupinus albus HOM05D005179 ORTHO05D006225 4.5e-35 151.8 157 63.1
TPR.G1598 Trifolium pratense HOM05D005179 ORTHO05D006225 8.5e-34 147.5 155 61.3
Medtr1g032050 Medicago truncatula HOM05D005179 ORTHO05D006225 5.5e-33 144.8 161 55.9
Medtr1g032400 Medicago truncatula HOM05D005179 ORTHO05D006225 5.5e-33 144.8 161 55.9
arahy.Tifrunner.gnm1.ann1.YN028F Arachis hypogaea HOM05D000257 ORTHO05D009070 1.2e-32 143.7 160 60.0
Psat3g065120 Pisum sativum HOM05D005179 ORTHO05D006225 2.7e-32 142.5 172 57.0
Lalb_Chr01g0020211 Lupinus albus HOM05D005179 ORTHO05D006225 4.6e-32 141.7 171 55.6
Psat6g061040 Pisum sativum HOM05D005179 ORTHO05D006225 6.1e-32 141.4 141 58.9
arahy.Tifrunner.gnm1.ann1.AZF37F Arachis hypogaea HOM05D000257 ORTHO05D009070 7.9e-32 141.0 159 59.7
Glyma.02G148700 Glycine max HOM05D005179 ORTHO05D006225 7.9e-32 141.0 157 59.9
Glyma.10G025200 Glycine max HOM05D005179 ORTHO05D006225 2.3e-31 139.4 157 59.2
Phvul.007G170000 Phaseolus vulgaris HOM05D005179 ORTHO05D006225 3.9e-31 138.7 157 49.0
Lalb_Chr25g0290231 Lupinus albus HOM05D005179 ORTHO05D006225 5.1e-31 138.3 180 51.7
Ca_09769_v3 Cicer arietinum L. HOM05D005179 ORTHO05D006225 7.4e-30 134.4 157 59.2
VMungo0720G0860 Vigna mungo HOM05D005179 ORTHO05D006225 4.8e-29 131.7 156 46.2
CANSAT25G0479 Cannabis sativa HOM05D005179 ORTHO05D006225 6.5e-26 121.3 155 49.7
Dinv32955 Davidia involucrata HOM05D005179 ORTHO05D006225 1.9e-25 119.8 150 52.7
Atru.chr5.1383 Acer truncatum HOM05D005179 ORTHO05D006225 2.5e-25 119.4 154 53.9
Ciclev10024447m.g Citrus clementina HOM05D005179 ORTHO05D006225 9.4e-25 117.5 159 45.3
TWI59G1208 Tripterygium wilfordii HOM05D005179 ORTHO05D006225 1.4e-23 113.6 151 39.7
Thecc.01G282700 Theobroma cacao HOM05D005179 ORTHO05D006225 5.1e-23 111.7 144 55.6
Oeu015958.1 Olea europaea HOM05D005179 ORTHO05D006225 8.8e-23 110.9 143 47.6
Dinv11251 Davidia involucrata HOM05D005179 ORTHO05D006225 1.5e-22 110.2 128 53.9
Nitab4.5_0001028g0210 Nicotiana tabacum HOM05D005179 ORTHO05D006225 1.5e-22 110.2 162 39.5
Haze_04736 Corylus avellana HOM05D005179 ORTHO05D006225 2.6e-22 109.4 161 50.9
Hma1.2p1_0628F.1_g191965 Hydrangea macrophylla HOM05D005179 ORTHO05D006225 3.3e-22 109.0 159 47.8
CsaV3_7G028640 Cucumis sativus L. HOM05D005179 ORTHO05D006225 4.4e-22 108.6 149 43.0
Lsat_1_v5_gn_1_29921 Lactuca sativa HOM05D005179 ORTHO05D006225 7.4e-22 107.8 181 45.9
CiPaw.08G103900 Carya illinoinensis HOM05D005179 ORTHO05D006225 9.7e-22 107.5 172 45.9
Potri.002G215200 Populus trichocarpa HOM05D005179 ORTHO05D006225 9.7e-22 107.5 155 40.6
Potri.014G139200 Populus trichocarpa HOM05D005179 ORTHO05D006225 9.7e-22 107.5 123 49.6
Prupe.8G243700 Prunus persica HOM05D005179 ORTHO05D006225 2.8e-21 105.9 172 47.1
SalBow6G3683 Salvia bowleyana HOM05D005179 ORTHO05D006225 2.8e-21 105.9 119 47.1
Ah.08g213000 Amaranthus hybridus HOM05D005179 ORTHO05D006225 4.8e-21 105.1 150 45.3
CiPaw.07G093600 Carya illinoinensis HOM05D005179 ORTHO05D006225 6.3e-21 104.8 168 49.4
PGR044G1538 Punica granatum HOM05D005179 ORTHO05D006225 6.3e-21 104.8 161 47.8
ClCG09G006920 Citrullus lanatus HOM05D000257 ORTHO05D009070 8.2e-21 104.4 163 45.4
Solyc09g064900.1 Solanum lycopersicum HOM05D005179 ORTHO05D006225 8.2e-21 104.4 153 49.7
Sed0008634 Sechium edule HOM05D005179 ORTHO05D006225 1.1e-20 104.0 157 38.9
Sabra14G0104900 Salix brachista HOM05D005179 ORTHO05D006225 1.4e-20 103.6 128 55.5
Sed0008870 Sechium edule HOM05D005179 ORTHO05D006225 1.4e-20 103.6 151 41.1
Ah.15g091740 Amaranthus hybridus HOM05D005179 ORTHO05D006225 2.4e-20 102.8 156 48.7
MD03G1268100 Malus domestica HOM05D005179 ORTHO05D006225 2.4e-20 102.8 131 51.1
MELO3C015854.2 Cucumis melo HOM05D005179 ORTHO05D006225 3.1e-20 102.4 152 43.4
CSS0035012 Camellia sinensis var. sinensis HOM05D005179 ORTHO05D006225 4.1e-20 102.1 162 46.9
Migut.N02158 Erythranthe guttata HOM05D005179 ORTHO05D006225 5.3e-20 101.7 154 49.4
FAN20G2888 Fragaria x ananassa HOM05D005179 ORTHO05D006225 5.3e-20 101.7 161 46.6
MD11G1289000 Malus domestica HOM05D000257 ORTHO05D009070 7.0e-20 101.3 147 49.0
Sc24g0004150 Simmondsia chinensis HOM05D005179 ORTHO05D006225 7.0e-20 101.3 121 53.7
Duzib138G1054 Durio zibethinus HOM05D005179 ORTHO05D006225 1.2e-19 100.5 151 45.0
Sabra02G0167400 Salix brachista HOM05D005179 ORTHO05D006225 1.5e-19 100.1 148 41.2
MSTRG.21570 Avicennia marina HOM05D005179 ORTHO05D006225 2.0e-19 99.8 150 50.7
DCAR_018411 Daucus carota HOM05D005179 ORTHO05D006225 2.0e-19 99.8 151 49.7
Cfa006114 Carpinus fangiana HOM05D005179 ORTHO05D006225 3.5e-19 99.0 144 50.0
COL.COLO4_09131 Corchorus olitorius HOM05D005179 ORTHO05D006225 4.5e-19 98.6 156 46.8
MSTRG.18220 Avicennia marina HOM05D005179 ORTHO05D006225 7.7e-19 97.8 150 38.0
Gohir.A11G121400 Gossypium hirsutum HOM05D005179 ORTHO05D006225 7.7e-19 97.8 153 47.1
Gorai.007G135300 Gossypium raimondii HOM05D005179 ORTHO05D006225 1.7e-18 96.7 153 46.4
SalBow4G1980 Salvia bowleyana HOM05D005179 ORTHO05D006225 2.2e-18 96.3 145 49.7
CAN.G609.9 Capsicum annuum HOM05D005179 ORTHO05D006225 2.9e-18 95.9 153 42.5
Gohir.D11G126500 Gossypium hirsutum HOM05D005179 ORTHO05D006225 5.0e-18 95.1 153 46.4
TAR636G3147 Trochodendron aralioides HOM05D005179 ORTHO05D006225 6.5e-18 94.7 135 51.9
ClCG07G000210 Citrullus lanatus HOM05D005179 ORTHO05D006225 8.5e-18 94.4 147 48.3
SGA_v2.0_scaffold11G05800 Striga asiatica HOM05D005179 ORTHO05D006225 8.5e-18 94.4 120 40.0
Sc05g0004870 Simmondsia chinensis HOM05D005179 ORTHO05D006225 1.4e-17 93.6 157 45.9
Sed0002169 Sechium edule HOM05D005179 ORTHO05D006225 1.9e-17 93.2 146 47.3
unitig_8.g3720 Utricularia gibba HOM05D005179 ORTHO05D006225 1.9e-17 93.2 149 47.7
Potri.014G139100 Populus trichocarpa HOM05D005179 ORTHO05D006225 4.2e-17 92.0 160 43.8
Aqoxy2G03259 Aquilegia oxysepala HOM05D005179 ORTHO05D006225 5.5e-17 91.7 162 46.3
Sopen09g026600 Solanum pennellii HOM05D005179 ORTHO05D006225 9.4e-17 90.9 155 47.1
THA.LOC104802228 Tarenaya hassleriana HOM05D005179 ORTHO05D006225 9.4e-17 90.9 172 41.3
C06p28620 Brassica napus HOM05D005179 ORTHO05D006225 2.1e-16 89.7 183 39.9
Manes.01G209300 Manihot esculenta HOM05D005179 ORTHO05D006225 2.7e-16 89.4 199 37.2
Rhsim13G0023300 Rhododendron simsii HOM05D005179 ORTHO05D006225 2.7e-16 89.4 175 39.4
DCAR_002746 Daucus carota HOM05D005179 ORTHO05D006225 3.6e-16 89.0 143 46.9
Sopen02g023170 Solanum pennellii HOM05D005179 ORTHO05D006225 3.6e-16 89.0 123 48.8
PGSC0003DMG400020123 Solanum tuberosum HOM05D005179 ORTHO05D006225 3.6e-16 89.0 130 48.5
ECA247G2094 Erigeron canadensis HOM05D005179 ORTHO05D006225 4.7e-16 88.6 58 58.6
FvH4_2g23841 Fragaria vesca HOM05D005179 ORTHO05D006225 6.1e-16 88.2 54 61.1
Aa31LG10G16940 Aethionema arabicum HOM05D005179 ORTHO05D006225 1.0e-15 87.4 130 47.7
Cpa.g.sc64.166 Carica papaya HOM05D005179 ORTHO05D006225 1.0e-15 87.4 148 48.0
FAN24G3244 Fragaria x ananassa HOM05D005179 ORTHO05D006225 1.0e-15 87.4 54 61.1
TWI59G0379 Tripterygium wilfordii HOM05D005179 ORTHO05D006225 1.4e-15 87.0 213 34.3
Migut.D00272 Erythranthe guttata HOM05D005179 ORTHO05D006225 1.8e-15 86.7 169 45.0
FAN27G1844 Fragaria x ananassa HOM05D005179 ORTHO05D006225 1.8e-15 86.7 54 59.3
Potri.004G022700 Populus trichocarpa HOM05D005179 ORTHO05D006225 1.8e-15 86.7 145 37.2
Cc01_g19710 Coffea canephora HOM05D005179 ORTHO05D006225 3.9e-15 85.5 170 41.2
RcHm_v2.0_Chr6g0291441 Rosa chinensis HOM05D005179 ORTHO05D006225 3.9e-15 85.5 202 38.1
FAN15G0349 Fragaria x ananassa HOM05D005179 ORTHO05D006225 5.2e-15 85.1 54 61.1
FAN15G1538 Fragaria x ananassa HOM05D005179 ORTHO05D006225 5.2e-15 85.1 54 61.1
BolC6t38030H Brassica oleracea HOM05D005179 ORTHO05D006225 8.8e-15 84.3 227 34.8
Manes.05G074000 Manihot esculenta HOM05D005179 ORTHO05D006225 8.8e-15 84.3 215 38.1
Manes.05G074200 Manihot esculenta HOM05D005179 ORTHO05D006225 8.8e-15 84.3 150 40.0
Nitab4.5_0002386g0020 Nicotiana tabacum HOM05D005179 ORTHO05D006225 8.8e-15 84.3 56 55.4
THA.LOC104817549 Tarenaya hassleriana HOM05D005179 ORTHO05D006225 8.8e-15 84.3 145 44.1
Actinidia21103 Actinidia chinensis HOM05D000756 ORTHO05D000604 1.1e-14 84.0 141 44.0
HanXRQChr15g0466391 Helianthus annuus HOM05D005179 ORTHO05D006225 1.1e-14 84.0 53 56.6
Eucgr.K03387 Eucalyptus grandis HOM05D005179 ORTHO05D006225 1.5e-14 83.6 142 41.5
SGA_v2.0_scaffold80G25940 Striga asiatica HOM05D005179 ORTHO05D006225 1.5e-14 83.6 134 47.0
A09p54910 Brassica napus HOM05D000257 ORTHO05D009070 2.6e-14 82.8 193 33.2
Gorai.009G014800 Gossypium raimondii HOM05D005179 ORTHO05D006225 2.6e-14 82.8 149 42.3
Manes.01G209200 Manihot esculenta HOM05D005179 ORTHO05D006225 2.6e-14 82.8 124 45.2
Gohir.D12G005300 Gossypium hirsutum HOM05D005179 ORTHO05D006225 3.3e-14 82.4 149 42.3
Gorai.008G005200 Gossypium raimondii HOM05D005179 ORTHO05D006225 3.3e-14 82.4 149 42.3
Zm00001eb329500 Zea mays HOM05D005179 ORTHO05D006225 4.4e-14 82.0 47 66.0
A07p26240 Brassica napus HOM05D005179 ORTHO05D006225 5.7e-14 81.6 233 33.9
BraA07t30267Z Brassica rapa HOM05D005179 ORTHO05D006225 5.7e-14 81.6 233 33.9
Gohir.A12G005800 Gossypium hirsutum HOM05D005179 ORTHO05D006225 5.7e-14 81.6 149 41.6
Zm00001eb017420 Zea mays HOM05D005179 ORTHO05D006225 7.4e-14 81.3 47 63.8
CARHR173410 Cardamine hirsuta HOM05D005179 ORTHO05D006225 9.7e-14 80.9 53 54.7
ECA236G2709 Erigeron canadensis HOM05D005179 ORTHO05D006225 9.7e-14 80.9 50 60.0
Os07g0655800 Oryza sativa ssp. japonica HOM05D005179 ORTHO05D006225 9.7e-14 80.9 47 63.8
Gohir.D08G077500 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.3e-13 80.5 156 40.4
BraA09t40901Z Brassica rapa HOM05D000257 ORTHO05D009070 1.7e-13 80.1 190 34.2
GSVIVG01011106001 Vitis vinifera HOM05D005179 ORTHO05D006225 1.7e-13 80.1 53 56.6
C08p37810 Brassica napus HOM05D000257 ORTHO05D009070 2.2e-13 79.7 53 52.8
BolC8t51360H Brassica oleracea HOM05D000257 ORTHO05D009070 2.2e-13 79.7 53 52.8
Zm00001eb394420 Zea mays HOM05D005179 ORTHO05D006225 2.2e-13 79.7 47 63.8
AL5G45930 Arabidopsis lyrata HOM05D005179 ORTHO05D006225 2.8e-13 79.3 53 52.8
AT3G63095 Arabidopsis thaliana HOM05D005179 ORTHO05D006225 2.8e-13 79.3 53 52.8
Carub.0005s2976 Capsella rubella HOM05D005179 ORTHO05D006225 2.8e-13 79.3 53 52.8
Nn1g02158 Nelumbo nucifera HOM05D005179 ORTHO05D006225 3.7e-13 79.0 149 43.0
Gorai.004G082400 Gossypium raimondii HOM05D005179 ORTHO05D006225 1.4e-12 77.0 164 40.9
Gohir.D08G077600 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.8e-12 76.6 160 29.4
Os03g0357500 Oryza sativa ssp. japonica HOM05D005179 ORTHO05D006225 2.4e-12 76.3 47 57.4
PSO210G7214 Papaver somniferum HOM05D005179 ORTHO05D006225 2.4e-12 76.3 137 40.1
A04p00290 Brassica napus HOM05D005179 ORTHO05D006225 4.1e-12 75.5 53 47.2
BolC4t24544H Brassica oleracea HOM05D005179 ORTHO05D006225 4.1e-12 75.5 53 47.2
BraA04t15748Z Brassica rapa HOM05D005179 ORTHO05D006225 4.1e-12 75.5 53 47.2
PSO832G0665 Papaver somniferum HOM05D005179 ORTHO05D006225 4.1e-12 75.5 165 36.4
ATR0626G310 Amborella trichopoda HOM05D005179 ORTHO05D006225 9.1e-12 74.3 116 44.0
Gohir.A08G069300 Gossypium hirsutum HOM05D005179 ORTHO05D006225 9.1e-12 74.3 163 40.5
Rhsim01G0275800 Rhododendron simsii HOM05D000756 ORTHO05D000604 2.0e-11 73.2 158 36.7
C04p30120 Brassica napus HOM05D005179 ORTHO05D006225 2.6e-11 72.8 254 29.9
Oeu028081.1 Olea europaea HOM05D005179 ORTHO05D006225 1.0e-10 70.9 57 52.6
vmacro14931 Vaccinium macrocarpon HOM05D001530 ORTHO05D003676 1.0e-10 70.9 107 38.3
Gorai.004G082500 Gossypium raimondii HOM05D005179 ORTHO05D006225 1.7e-10 70.1 154 29.2
SGA_v2.0_scaffold258G45766 Striga asiatica HOM05D005179 ORTHO05D006225 1.7e-10 70.1 147 35.4
Aqoxy5G00531 Aquilegia oxysepala HOM05D001530 ORTHO05D003676 2.2e-10 69.7 52 48.1
PSO447G0321 Papaver somniferum HOM05D005179 ORTHO05D006225 8.5e-10 67.8 51 45.1
Nn4g26188 Nelumbo nucifera HOM05D005179 ORTHO05D006225 2.5e-09 66.2 151 37.7
PSO210G2426 Papaver somniferum HOM05D005179 ORTHO05D006225 2.5e-09 66.2 48 45.8
HPP92_008197 Vanilla planifolia HOM05D024720 ORTHO05D006225 2.1e-08 63.2 125 39.2
QL12p022365 Quercus lobata HOM05D005179 ORTHO05D006225 3.6e-08 62.4 46 52.2
Gohir.A08G069200 Gossypium hirsutum HOM05D005179 ORTHO05D006225 1.4e-07 60.5 52 44.2
Actinidia00740 Actinidia chinensis HOM05D005179 ORTHO05D006225 2.3e-07 59.7 42 50.0
Zm00001eb042810 Zea mays HOM05D024720 ORTHO05D030308 8.8e-07 57.8 150 38.0


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