Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.2e-129 466.5 237 100.0
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.5e-111 406.4 238 87.0
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 2.2e-110 402.5 231 91.8
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.0e-102 377.1 238 82.4
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 7.4e-90 334.3 251 73.7
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 7.4e-90 334.3 251 74.1
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 3.6e-84 315.5 242 69.8
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.9e-83 312.0 239 73.6
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 3.3e-82 308.9 238 72.3
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.8e-81 305.8 239 70.7
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.1e-80 302.4 239 68.2
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.6e-76 290.0 208 73.1
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 8.0e-76 287.7 210 70.0
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 1.8e-75 286.6 222 67.6
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.3e-75 286.2 238 66.4
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 3.0e-75 285.8 240 64.6
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 2.6e-74 282.7 197 75.1
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 5.7e-74 281.6 182 77.5
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 3.7e-73 278.9 186 75.3
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 3.7e-73 278.9 182 76.9
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 3.7e-73 278.9 218 67.0
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 8.2e-73 277.7 179 78.8
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.4e-72 276.9 210 70.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.8e-72 276.6 215 68.8
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 4.1e-72 275.4 221 66.1
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 5.3e-72 275.0 185 75.1
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 7.0e-72 274.6 181 76.8
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 7.0e-72 274.6 166 80.7
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.2e-71 273.9 166 80.7
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 2.0e-71 273.1 244 63.9
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.6e-71 272.7 189 74.6
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 4.5e-71 271.9 203 68.0
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.3e-70 270.4 197 69.0
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.3e-70 270.4 219 67.6
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.7e-70 270.0 203 67.5
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.2e-70 269.6 217 67.7
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 5.0e-70 268.5 186 73.1
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 5.0e-70 268.5 209 68.9
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 8.5e-70 267.7 183 73.8
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.1e-69 267.3 171 78.4
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.1e-69 267.3 232 64.2
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 9.4e-69 264.2 228 62.3
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 9.4e-69 264.2 222 66.2
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.7e-68 262.7 157 79.6
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 2.7e-68 262.7 232 62.9
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 3.6e-68 262.3 181 75.1
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 8.0e-68 261.2 213 64.3
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 8.0e-68 261.2 237 59.5
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 2.3e-67 259.6 169 74.6
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 3.0e-67 259.2 207 66.2
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 4.0e-67 258.8 154 77.9
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 4.0e-67 258.8 210 63.8
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 4.0e-67 258.8 223 62.8
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 5.2e-67 258.5 183 70.5
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 5.2e-67 258.5 143 86.7
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 8.8e-67 257.7 203 64.5
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 8.8e-67 257.7 185 71.4
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 1.5e-66 256.9 200 67.5
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 2.6e-66 256.1 231 61.9
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.4e-66 255.4 146 82.9
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 4.4e-66 255.4 224 64.3
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 5.7e-66 255.0 231 61.9
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 5.7e-66 255.0 224 64.3
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 9.7e-66 254.2 187 71.1
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 9.7e-66 254.2 229 63.8
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 2.8e-65 252.7 239 60.3
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 2.8e-65 252.7 194 69.1
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 2.8e-65 252.7 223 63.7
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 4.8e-65 251.9 150 79.3
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 6.3e-65 251.5 176 73.9
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 8.3e-65 251.1 226 62.8
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 4.1e-64 248.8 237 59.1
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 7.0e-64 248.1 158 74.1
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 2.0e-63 246.5 209 61.7
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 3.5e-63 245.7 195 66.7
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 7.7e-63 244.6 162 72.2
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 7.7e-63 244.6 185 65.4
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 1.0e-62 244.2 168 72.0
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 1.0e-62 244.2 168 72.0
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.3e-62 243.8 143 78.3
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.3e-62 243.8 138 84.1
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.8e-62 242.3 145 77.9
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 6.5e-62 241.5 137 83.2
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 8.5e-62 241.1 221 58.8
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 8.5e-62 241.1 221 58.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 4.2e-61 238.8 171 66.7
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 9.4e-61 237.7 180 70.6
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 2.1e-60 236.5 134 82.8
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.0e-59 232.3 129 86.0
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.0e-59 232.3 175 66.9
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.5e-58 230.3 153 69.9
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.0e-58 229.9 134 81.3
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 2.6e-58 229.6 159 72.3
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 9.1e-56 221.1 164 66.5
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 5.2e-51 205.3 183 56.8
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.2e-44 184.1 98 84.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 1.0e-43 181.0 89 93.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 8.9e-43 177.9 174 60.9
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 2.0e-42 176.8 153 54.9
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 4.4e-42 175.6 130 62.3
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 5.0e-38 162.2 196 47.4
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 5.0e-38 162.2 170 55.3
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 2.5e-37 159.8 136 61.0
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.1e-36 156.8 117 70.1
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 3.6e-36 156.0 132 59.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 5.2e-35 152.1 75 89.3
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 3.7e-33 146.0 93 77.4
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 1.1e-32 144.4 137 59.1
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 7.8e-31 138.3 84 76.2
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 2.5e-29 133.3 83 80.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.4e-27 127.5 80 77.5
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.7e-25 120.6 68 79.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 7.8e-23 111.7 56 89.3


User provided reference genes

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