Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G119400 Glycine max HOM05D006208 ORTHO05D007606 1.2e-124 449.9 239 100.0
VMungo1383G1214 Vigna mungo HOM05D006208 ORTHO05D007606 8.2e-97 357.5 233 80.7
Ca_03440_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 8.0e-84 314.3 234 70.5
Ca_08778_v3 Cicer arietinum L. HOM05D006208 ORTHO05D007606 8.0e-84 314.3 234 70.5
Lalb_Chr22g0358421 Lupinus albus HOM05D006208 ORTHO05D007606 2.0e-82 309.7 231 70.6
Medtr7g087140 Medicago truncatula HOM05D006208 ORTHO05D007606 3.4e-82 308.9 234 73.1
Lj1g0003173 Lotus japonicus HOM05D006208 ORTHO05D007606 1.1e-77 293.9 234 67.5
QL07p016540 Quercus lobata HOM05D006208 ORTHO05D007606 1.8e-75 286.6 234 65.4
Phvul.001G107700 Phaseolus vulgaris HOM05D006208 ORTHO05D007606 4.0e-75 285.4 187 79.7
RcHm_v2.0_Chr3g0495701 Rosa chinensis HOM05D006208 ORTHO05D007606 8.3e-73 277.7 233 61.8
arahy.Tifrunner.gnm1.ann1.71CHM8 Arachis hypogaea HOM05D006208 ORTHO05D007606 4.1e-72 275.4 236 63.6
Manes.08G150900 Manihot esculenta HOM05D006208 ORTHO05D007606 7.0e-72 274.6 235 60.9
TWI34G1475 Tripterygium wilfordii HOM05D006208 ORTHO05D007606 9.2e-72 274.2 235 62.1
Duzib177G0527 Durio zibethinus HOM05D006208 ORTHO05D007606 2.0e-71 273.1 234 62.4
MD12G1014000 Malus domestica HOM05D006208 ORTHO05D007606 2.7e-71 272.7 233 61.8
Ciclev10032470m.g Citrus clementina HOM05D006208 ORTHO05D007606 1.7e-70 270.0 233 60.5
Thecc.05G239100 Theobroma cacao HOM05D006208 ORTHO05D007606 3.0e-70 269.2 232 59.9
Potri.013G067600 Populus trichocarpa HOM05D006208 ORTHO05D007606 1.6e-68 263.5 232 61.6
Sabra13G0059000 Salix brachista HOM05D006208 ORTHO05D007606 1.4e-67 260.4 239 57.3
Gorai.013G113800 Gossypium raimondii HOM05D006208 ORTHO05D007606 6.8e-67 258.1 216 60.6
vmacro07634 Vaccinium macrocarpon HOM05D006208 ORTHO05D007606 6.8e-67 258.1 248 56.9
Gohir.D13G101700 Gossypium hirsutum HOM05D006208 ORTHO05D007606 8.9e-67 257.7 216 60.6
FAN13G0695 Fragaria x ananassa HOM05D006208 ORTHO05D007606 2.0e-66 256.5 237 60.3
GSVIVG01029918001 Vitis vinifera HOM05D006208 ORTHO05D007606 4.4e-66 255.4 233 57.1
FAN04G2426 Fragaria x ananassa HOM05D006208 ORTHO05D007606 1.3e-65 253.8 237 59.5
Gohir.A13G096300 Gossypium hirsutum HOM05D006208 ORTHO05D007606 4.9e-65 251.9 216 59.3
BcaB07g34110 Brassica carinata HOM05D006208 ORTHO05D007606 8.3e-65 251.1 232 56.9
CARHR008630 Cardamine hirsuta HOM05D006208 ORTHO05D007606 8.3e-65 251.1 231 55.0
FAN18G4346 Fragaria x ananassa HOM05D006208 ORTHO05D007606 1.1e-64 250.8 237 60.3
BcaC05g24798 Brassica carinata HOM05D006208 ORTHO05D007606 1.9e-64 250.0 231 57.6
Sopen10g035070 Solanum pennellii HOM05D006208 ORTHO05D007606 1.9e-64 250.0 234 56.0
Carub.0001s0806 Capsella rubella HOM05D006208 ORTHO05D007606 3.2e-64 249.2 230 54.8
BraA06t23774Z Brassica rapa HOM05D000200 ORTHO05D000262 4.1e-64 248.8 230 56.5
Lj1A1159G88 Lonicera japonica HOM05D006208 ORTHO05D007606 4.1e-64 248.8 239 57.3
A06p05650 Brassica napus HOM05D000200 ORTHO05D000262 9.2e-64 247.7 230 56.1
Cfa019872 Carpinus fangiana HOM05D006208 ORTHO05D007606 9.2e-64 247.7 211 59.7
MELO3C019160.2 Cucumis melo HOM05D006208 ORTHO05D007606 1.6e-63 246.9 233 55.4
COL.COLO4_08902 Corchorus olitorius HOM05D006208 ORTHO05D007606 2.0e-63 246.5 230 58.3
FvH4_3g02594 Fragaria vesca HOM05D006208 ORTHO05D007606 7.8e-63 244.6 237 57.0
CANSAT78G0878 Cannabis sativa HOM05D006208 ORTHO05D007606 1.0e-62 244.2 238 55.5
Solyc10g085660.3 Solanum lycopersicum HOM05D006208 ORTHO05D007606 1.0e-62 244.2 230 55.7
CiPaw.09G165300 Carya illinoinensis HOM05D006208 ORTHO05D007606 3.0e-62 242.7 236 56.8
Eucgr.K01547 Eucalyptus grandis HOM05D006208 ORTHO05D007606 5.0e-62 241.9 236 58.1
Nitab4.5_0015172g0010 Nicotiana tabacum HOM05D006208 ORTHO05D007606 5.0e-62 241.9 233 53.2
AUR62036506 Chenopodium quinoa HOM05D006208 ORTHO05D007606 8.6e-62 241.1 217 59.0
PGSC0003DMG400008402 Solanum tuberosum HOM05D006208 ORTHO05D007606 8.6e-62 241.1 227 55.1
FvH4_5g39040 Fragaria vesca HOM05D006208 ORTHO05D007606 1.9e-61 240.0 237 57.4
AL1G19150 Arabidopsis lyrata HOM05D006208 ORTHO05D007606 2.5e-61 239.6 235 52.8
Nitab4.5_0000381g0210 Nicotiana tabacum HOM05D006208 ORTHO05D007606 4.3e-61 238.8 233 52.4
Psat3g085200 Pisum sativum HOM05D006208 ORTHO05D007606 4.3e-61 238.8 188 68.6
Migut.B00931 Erythranthe guttata HOM05D006208 ORTHO05D007606 9.5e-61 237.7 235 52.3
Dinv14560 Davidia involucrata HOM05D006208 ORTHO05D007606 1.2e-60 237.3 236 55.1
AT1G08710 Arabidopsis thaliana HOM05D006208 ORTHO05D007606 1.6e-60 236.9 230 53.9
THA.LOC104798848 Tarenaya hassleriana HOM05D006208 ORTHO05D007606 2.8e-60 236.1 232 54.3
Atru.chr2.1570 Acer truncatum HOM05D006208 ORTHO05D007606 3.6e-60 235.7 232 56.0
EL10As12g24012 Beta vulgaris HOM05D006208 ORTHO05D007606 6.8e-59 231.5 240 54.2
CAN.G1018.11 Capsicum annuum HOM05D006208 ORTHO05D007606 8.9e-59 231.1 235 51.5
SGA_v2.0_scaffold66G22407 Striga asiatica HOM05D006208 ORTHO05D007606 2.0e-58 229.9 224 52.2
Thhalv10008513m.g Eutrema salsugineum HOM05D006208 ORTHO05D007606 4.4e-58 228.8 230 53.9
Haze_20379 Corylus avellana HOM05D006208 ORTHO05D007606 7.5e-58 228.0 233 55.8
arahy.Tifrunner.gnm1.ann1.2NMK5X Arachis hypogaea HOM05D006208 ORTHO05D007606 1.3e-57 227.3 189 63.5
Cc03_g15330 Coffea canephora HOM05D006208 ORTHO05D007606 1.3e-57 227.3 251 53.0
ClCG04G006060 Citrullus lanatus HOM05D006208 ORTHO05D007606 4.9e-57 225.3 292 47.6
Hma1.2p1_1127F.1_g259670 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 4.9e-57 225.3 238 52.5
MSTRG.19726 Avicennia marina HOM05D006208 ORTHO05D007606 5.4e-56 221.9 238 50.0
Nn8g39480 Nelumbo nucifera HOM05D006208 ORTHO05D007606 7.1e-56 221.5 236 51.3
unitig_0.g581 Utricularia gibba HOM05D006208 ORTHO05D007606 1.6e-55 220.3 214 52.3
Sed0009124 Sechium edule HOM05D006208 ORTHO05D007606 4.6e-55 218.8 234 56.4
Peaxi162Scf00146g00097 Petunia axillaris HOM05D006208 ORTHO05D007606 6.0e-55 218.4 227 49.8
Hund10725 Selenicereus undatus HOM05D006208 ORTHO05D007606 1.0e-54 217.6 242 52.5
Aa31sc449G40 Aethionema arabicum HOM05D006208 ORTHO05D007606 3.0e-54 216.1 230 49.1
Sp1g07360 Schrenkiella parvula HOM05D006208 ORTHO05D007606 3.9e-54 215.7 231 51.9
SalBow6G5221 Salvia bowleyana HOM05D006208 ORTHO05D007606 2.1e-52 209.9 235 45.5
ECA232G0512 Erigeron canadensis HOM05D006208 ORTHO05D007606 5.2e-51 205.3 229 48.9
Hma1.2p1_0776F.1_g216610 Hydrangea macrophylla HOM05D006208 ORTHO05D007606 5.2e-51 205.3 218 52.3
Aqoxy6G01592 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 6.8e-51 204.9 240 45.8
MBI19_g04334_MAGBIO Magnolia biondii HOM05D006208 ORTHO05D007606 9.9e-50 201.1 227 47.1
DCAR_020701 Daucus carota HOM05D006208 ORTHO05D007606 2.9e-49 199.5 238 48.7
Peaxi162Scf00146g00107 Petunia axillaris HOM05D006208 ORTHO05D007606 1.1e-48 197.6 208 49.5
Peaxi162Scf62544g00003 Petunia axillaris HOM05D006208 ORTHO05D007606 1.1e-48 197.6 208 49.5
CsaV3_4G029050 Cucumis sativus L. HOM05D006208 ORTHO05D007606 1.1e-45 187.6 175 56.6
HPP92_022884 Vanilla planifolia HOM05D006208 ORTHO05D007606 4.7e-44 182.2 210 47.6
Ah.12g062010 Amaranthus hybridus HOM05D006208 ORTHO05D007606 6.2e-44 181.8 200 49.5
ATR0068G109 Amborella trichopoda HOM05D006208 ORTHO05D007606 8.1e-44 181.4 237 43.0
HanXRQChr09g0255371 Helianthus annuus HOM05D006208 ORTHO05D007606 1.6e-39 167.2 182 48.9
Cpa.g.sc73.15 Carica papaya HOM05D006208 ORTHO05D007606 2.3e-38 163.3 160 52.5
TAR636G0902 Trochodendron aralioides HOM05D006208 ORTHO05D007606 2.1e-36 156.8 183 48.1
SEGI_27241 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 2.4e-35 153.3 211 40.3
Lsat_1_v5_gn_4_159701 Lactuca sativa HOM05D006208 ORTHO05D007606 9.9e-34 147.9 202 42.1
Prupe.7G018500 Prunus persica HOM05D006208 ORTHO05D007606 1.7e-33 147.1 132 59.8
TPR.G7831 Trifolium pratense HOM05D006208 ORTHO05D007606 1.7e-33 147.1 143 54.5
Zm00001eb149890 Zea mays HOM05D006208 ORTHO05D007606 1.7e-33 147.1 183 45.4
VMungo1383G2538 Vigna mungo HOM05D006208 ORTHO05D007606 8.4e-33 144.8 147 59.2
Rhsim03G0045600 Rhododendron simsii HOM05D006208 ORTHO05D007606 4.2e-32 142.5 155 52.3
Os01g0814700 Oryza sativa ssp. japonica HOM05D006208 ORTHO05D007606 7.1e-32 141.7 184 45.1
TPR.G35926 Trifolium pratense HOM05D006208 ORTHO05D007606 2.7e-31 139.8 101 71.3
C05p06800 Brassica napus HOM05D006208 ORTHO05D007606 6.0e-31 138.7 134 54.5
CDE09G0594 Ceratophyllum demersum HOM05D002946 ORTHO05D007606 1.3e-30 137.5 161 47.8
BolC5t29439H Brassica oleracea HOM05D006208 ORTHO05D007606 3.0e-30 136.3 134 53.7
AUR62037069 Chenopodium quinoa HOM05D006208 ORTHO05D007606 4.0e-27 125.9 108 63.0
Pp3c18_14450 Physcomitrium patens HOM05D006208 ORTHO05D007606 5.3e-27 125.6 243 32.5
Sc22g0000860 Simmondsia chinensis HOM05D006208 ORTHO05D007606 1.5e-26 124.0 102 59.8
Rhsim03G0045700 Rhododendron simsii HOM05D006208 ORTHO05D007606 7.6e-26 121.7 98 63.3
SMO351G0165 Selaginella moellendorffii HOM05D006208 ORTHO05D007606 3.2e-24 116.3 221 31.7
FAN08G0500 Fragaria x ananassa HOM05D006208 ORTHO05D007606 7.9e-23 111.7 93 63.4
Medtr7g087330 Medicago truncatula HOM05D006208 ORTHO05D007606 3.0e-22 109.8 100 63.0
SHI14855 Sapria himalayana HOM05D000023 ORTHO05D000014 8.7e-22 108.2 178 41.0
CBR_g36542 Chara braunii HOM05D006208 ORTHO05D007606 4.3e-21 105.9 246 31.7
Medtr7g087170 Medicago truncatula HOM05D006208 ORTHO05D007606 1.4e-19 100.9 82 59.8
FAN21G1425 Fragaria x ananassa HOM05D006208 ORTHO05D007606 6.9e-19 98.6 85 61.2
TPR.G15311 Trifolium pratense HOM05D006208 ORTHO05D007606 9.0e-19 98.2 85 60.0
Peaxi162Scf00146g00108 Petunia axillaris HOM05D006208 ORTHO05D007606 1.8e-14 84.0 77 51.9
C05p06810 Brassica napus HOM05D000200 ORTHO05D000262 5.1e-14 82.4 77 54.5
BolC5t29440H Brassica oleracea HOM05D000200 ORTHO05D000262 5.1e-14 82.4 77 54.5
Sc22g0000880 Simmondsia chinensis HOM05D006208 ORTHO05D007606 5.1e-14 82.4 153 36.6
Mapoly0047s0023 Marchantia polymorpha HOM05D006208 ORTHO05D007606 8.7e-14 81.6 214 27.6
TPR.G7822 Trifolium pratense HOM05D006208 ORTHO05D007606 1.5e-13 80.9 242 31.8
SHI14857 Sapria himalayana HOM05D006208 ORTHO05D007606 1.9e-13 80.5 53 66.0
Oeu054958.1 Olea europaea HOM05D006208 ORTHO05D007606 1.6e-12 77.4 74 52.7
TPR.G7816 Trifolium pratense HOM05D006208 ORTHO05D007606 1.1e-11 74.7 66 59.1
Oeu029768.1 Olea europaea HOM05D006208 ORTHO05D007606 4.5e-10 69.3 76 36.8
AagrBONN_evm.TU.Sc2ySwM_117.1480 Anthoceros agrestis HOM05D006208 ORTHO05D007606 1.3e-09 67.8 139 28.8
Oeu029769.2 Olea europaea HOM05D006208 ORTHO05D007606 1.7e-09 67.4 52 46.2
arahy.Tifrunner.gnm1.ann1.Q1DBZB Arachis hypogaea HOM05D006208 ORTHO05D007606 2.2e-09 67.0 61 59.0
Aqoxy3G03625 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 3.8e-09 66.2 60 46.7
Aqoxy3G03662 Aquilegia oxysepala HOM05D006208 ORTHO05D007606 7.2e-08 62.0 113 31.9
Oeu032547.1 Olea europaea HOM05D006208 ORTHO05D007606 7.2e-08 62.0 52 44.2
SalBow5G5293 Salvia bowleyana HOM05D000001 ORTHO05D009952 2.7e-07 60.1 106 36.8
AL5G15230 Arabidopsis lyrata HOM05D001124 ORTHO05D007606 1.0e-06 58.2 65 46.2
Pp3c18_14463 Physcomitrium patens HOM05D006208 ORTHO05D007606 1.4e-06 57.8 105 33.3
SEGI_30866 Sequoiadendron giganteum HOM05D006208 ORTHO05D007606 1.8e-06 57.4 56 44.6
Peaxi162Scf00146g00098 Petunia axillaris HOM05D006208 ORTHO05D007606 2.3e-06 57.0 44 56.8


User provided reference genes

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