Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G112300 Glycine max HOM05D004137 ORTHO05D004804 6.7e-30 133.3 63 100.0
Phvul.001G111100 Phaseolus vulgaris HOM05D004137 ORTHO05D004804 3.2e-24 114.4 63 85.7
VMungo1383G3601 Vigna mungo HOM05D001721 ORTHO05D001804 5.5e-24 113.6 63 85.7
Medtr7g085660 Medicago truncatula HOM05D004137 ORTHO05D004804 2.3e-14 81.6 65 66.2
Lj1g0005734 Lotus japonicus HOM05D004137 ORTHO05D004804 4.8e-12 73.9 66 60.6
Lalb_Chr14g0364521 Lupinus albus HOM05D004137 ORTHO05D004804 5.3e-11 70.5 74 54.1
Manes.08G144511 Manihot esculenta HOM05D004137 ORTHO05D004804 1.2e-10 69.3 59 62.7
Prupe.7G004500 Prunus persica HOM05D004137 ORTHO05D004804 2.0e-10 68.6 54 61.1
Potri.013G057766 Populus trichocarpa HOM05D004137 ORTHO05D004804 3.4e-10 67.8 62 59.7
Gorai.008G191500 Gossypium raimondii HOM05D004137 ORTHO05D004804 4.5e-10 67.4 68 55.9
Gohir.A12G175500 Gossypium hirsutum HOM05D004137 ORTHO05D004804 5.9e-10 67.0 68 55.9
Gohir.D12G178750 Gossypium hirsutum HOM05D004137 ORTHO05D004804 5.9e-10 67.0 68 54.4
vmacro20990 Vaccinium macrocarpon HOM05D004137 ORTHO05D004804 1.0e-09 66.2 62 58.1
Cfa016445 Carpinus fangiana HOM05D001721 ORTHO05D001804 1.3e-09 65.9 48 68.8
Haze_19423 Corylus avellana HOM05D004137 ORTHO05D004804 1.3e-09 65.9 48 68.8
Potri.013G057832 Populus trichocarpa HOM05D004137 ORTHO05D004804 1.3e-09 65.9 59 59.3
CiPaw.09G002200 Carya illinoinensis HOM05D004137 ORTHO05D004804 2.2e-09 65.1 48 66.7
Cpa.g.sc51.119 Carica papaya HOM05D004137 ORTHO05D004804 5.0e-09 63.9 64 53.1
FvH4_4g27600 Fragaria vesca HOM05D004137 ORTHO05D004804 1.9e-08 62.0 53 58.5
Migut.J01885 Erythranthe guttata HOM05D004137 ORTHO05D004804 2.5e-08 61.6 48 64.6
Manes.09G141000 Manihot esculenta HOM05D004137 ORTHO05D004804 3.2e-08 61.2 59 55.9
BcaC05g29894 Brassica carinata HOM05D004137 ORTHO05D004804 7.2e-08 60.1 70 45.7
BolC5t34968H Brassica oleracea HOM05D004137 ORTHO05D004804 7.2e-08 60.1 70 45.7
Ah.13g075420 Amaranthus hybridus HOM05D004137 ORTHO05D004804 1.2e-07 59.3 56 58.9
CAN.G960.46 Capsicum annuum HOM05D004137 ORTHO05D004804 2.7e-07 58.2 48 58.3
Lsat_1_v5_gn_1_59720 Lactuca sativa HOM05D004137 ORTHO05D004804 3.6e-07 57.8 48 58.3
MD11G1003200 Malus domestica HOM05D004137 ORTHO05D004804 4.6e-07 57.4 48 56.2
A05p43490 Brassica napus HOM05D004137 ORTHO05D004804 6.1e-07 57.0 70 44.3
BraA05t23089Z Brassica rapa HOM05D004137 ORTHO05D004804 6.1e-07 57.0 70 44.3
BcaC05g30244 Brassica carinata HOM05D004137 ORTHO05D004804 7.9e-07 56.6 70 44.3
BcaC05g30291 Brassica carinata HOM05D004137 ORTHO05D004804 7.9e-07 56.6 70 44.3
Ciclev10023092m.g Citrus clementina HOM05D004137 ORTHO05D004804 7.9e-07 56.6 48 58.3
Cc06_g23020 Coffea canephora HOM05D004137 ORTHO05D004804 7.9e-07 56.6 54 51.9
QL01p003617 Quercus lobata HOM05D004137 ORTHO05D004804 1.0e-06 56.2 48 56.2
ClCG10G013400 Citrullus lanatus HOM05D004137 ORTHO05D004804 1.8e-06 55.5 54 55.6
Carub.0003s0313 Capsella rubella HOM05D004137 ORTHO05D004804 2.3e-06 55.1 57 47.4
MD03G1003400 Malus domestica HOM05D004137 ORTHO05D004804 2.3e-06 55.1 48 52.1
Haze_22939 Corylus avellana HOM05D004137 ORTHO05D004804 3.0e-06 54.7 48 56.2
Prupe.6G003100 Prunus persica HOM05D004137 ORTHO05D004804 3.0e-06 54.7 48 52.1
Solyc10g078570.1 Solanum lycopersicum HOM05D004137 ORTHO05D004804 3.9e-06 54.3 48 54.2
PGSC0003DMG400008382 Solanum tuberosum HOM05D004137 ORTHO05D004804 3.9e-06 54.3 48 54.2


User provided reference genes

Program Settings