Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 6.7e-60 233.8 116 100.0
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 2.2e-39 165.6 89 92.1
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 1.9e-38 162.5 89 88.8
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.5e-38 162.2 89 89.9
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 3.0e-36 155.2 89 83.1
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 3.3e-35 151.8 115 65.2
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 7.4e-35 150.6 100 74.0
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 9.7e-35 150.2 75 96.0
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 4.8e-34 147.9 83 84.3
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.3e-34 147.5 95 75.8
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.3e-34 147.5 95 75.8
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 8.2e-34 147.1 103 73.8
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.2e-34 147.1 96 72.9
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 1.1e-33 146.7 89 80.9
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 1.4e-33 146.4 93 76.3
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 2.4e-33 145.6 76 88.2
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 7.0e-33 144.1 89 79.8
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 1.5e-32 142.9 89 76.4
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 2.6e-32 142.1 89 78.7
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 5.9e-32 141.0 113 64.6
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 5.9e-32 141.0 92 75.0
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.7e-32 140.6 100 71.0
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 2.9e-31 138.7 87 75.9
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 2.9e-31 138.7 93 71.0
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.9e-31 138.7 117 62.4
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 5.0e-31 137.9 92 70.7
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 6.5e-31 137.5 102 66.7
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 8.5e-31 137.1 92 70.7
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 1.9e-30 136.0 89 75.3
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 3.2e-30 135.2 83 79.5
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 5.5e-30 134.4 96 68.8
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 9.4e-30 133.7 94 69.1
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 9.4e-30 133.7 89 74.2
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 2.1e-29 132.5 89 71.9
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 2.1e-29 132.5 89 73.0
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 2.7e-29 132.1 89 70.8
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.6e-29 131.7 89 74.2
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.6e-29 131.7 89 70.8
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 4.7e-29 131.3 89 73.0
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 6.1e-29 131.0 103 65.0
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 6.1e-29 131.0 89 74.2
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 6.1e-29 131.0 88 68.2
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 8.0e-29 130.6 89 70.8
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 1.4e-28 129.8 89 70.8
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 1.4e-28 129.8 98 64.3
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 1.4e-28 129.8 89 73.0
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 1.8e-28 129.4 89 70.8
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 1.8e-28 129.4 89 74.2
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 1.8e-28 129.4 112 61.6
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 2.3e-28 129.0 78 78.2
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.3e-28 129.0 89 69.7
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 2.3e-28 129.0 92 68.5
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.0e-28 128.6 89 73.0
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.0e-28 128.6 89 69.7
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.0e-28 128.6 89 69.7
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 3.0e-28 128.6 93 67.7
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 3.9e-28 128.3 84 70.2
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 3.9e-28 128.3 87 70.1
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.9e-28 128.3 83 74.7
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 5.2e-28 127.9 99 65.7
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 5.2e-28 127.9 108 60.2
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.1e-27 126.7 85 69.4
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.1e-27 126.7 89 69.7
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.5e-27 126.3 91 69.2
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 1.5e-27 126.3 89 67.4
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 1.5e-27 126.3 89 69.7
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 2.0e-27 125.9 89 67.4
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 2.0e-27 125.9 89 68.5
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 2.0e-27 125.9 89 70.8
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 2.6e-27 125.6 78 73.1
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 2.6e-27 125.6 89 67.4
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 2.6e-27 125.6 89 67.4
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 2.6e-27 125.6 89 70.8
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 3.3e-27 125.2 75 81.3
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.4e-27 124.8 89 69.7
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 5.7e-27 124.4 86 67.4
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 5.7e-27 124.4 73 75.3
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.3e-26 123.2 90 67.8
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.7e-26 122.9 98 64.3
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 2.2e-26 122.5 76 72.4
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.8e-26 122.1 89 69.7
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 2.8e-26 122.1 91 64.8
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 2.8e-26 122.1 89 69.7
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.8e-26 121.3 82 72.0
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 4.8e-26 121.3 83 67.5
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 6.3e-26 120.9 89 62.9
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 8.2e-26 120.6 83 69.9
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 8.2e-26 120.6 89 65.2
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.4e-25 119.0 103 56.3
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 2.4e-25 119.0 75 74.7
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 9.1e-25 117.1 72 72.2
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 2.0e-24 115.9 121 53.7
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.0e-23 113.6 89 60.7
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.7e-23 112.8 89 66.3
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 2.2e-23 112.5 75 69.3
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 6.5e-23 110.9 89 65.2
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 8.5e-23 110.5 65 73.8
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 2.5e-22 109.0 66 72.7
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 8.0e-21 104.0 64 79.7
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.0e-20 103.6 73 67.1
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.4e-20 103.2 62 75.8
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.8e-20 102.8 72 65.3
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 4.0e-20 101.7 72 66.7
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 5.2e-20 101.3 72 63.9
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 5.2e-20 101.3 58 79.3
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 7.5e-19 97.4 72 62.5
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 8.3e-18 94.0 65 64.6
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 8.3e-18 94.0 93 53.8
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 8.3e-18 94.0 120 44.2
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 5.9e-16 87.8 85 51.8
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 7.7e-16 87.4 77 54.5
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 5.0e-15 84.7 74 54.1
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 3.6e-13 78.6 77 49.4
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 6.1e-13 77.8 73 54.8
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 1.0e-12 77.0 56 62.5
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 4.0e-12 75.1 68 52.9
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 8.8e-12 73.9 42 78.6
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 8.6e-07 57.4 50 50.0
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 8.6e-07 57.4 75 44.0


User provided reference genes

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