Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G093500 Glycine max HOM05D007835 ORTHO05D008482 1.4e-54 216.1 111 100.0
Glyma.16G054700 Glycine max HOM05D007835 ORTHO05D008482 1.6e-47 192.6 114 92.1
Phvul.001G092000 Phaseolus vulgaris HOM05D007835 ORTHO05D008482 1.9e-35 152.5 109 76.1
VMungo1383G1738 Vigna mungo HOM05D007835 ORTHO05D008482 2.1e-34 149.1 109 74.3
Lalb_Chr00c01g0403701 Lupinus albus HOM05D007835 ORTHO05D008482 3.1e-22 108.6 115 58.3
Lj1g0016807 Lotus japonicus HOM05D007835 ORTHO05D008482 2.5e-16 89.0 111 52.3
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 4.8e-15 84.7 115 48.7
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 1.4e-14 83.2 119 47.9
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 4.1e-14 81.6 116 50.0
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 6.9e-14 80.9 110 48.2
Medtr7g028780 Medicago truncatula HOM05D007835 ORTHO05D008482 2.6e-13 79.0 113 49.6
TPR.G29071 Trifolium pratense HOM05D000032 ORTHO05D008482 2.6e-13 79.0 104 51.9
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 1.1e-11 73.6 121 43.8
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 1.2e-10 70.1 120 41.7
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 1.2e-10 70.1 116 44.8
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 2.1e-10 69.3 116 38.8
arahy.Tifrunner.gnm1.ann1.TA4SKR Arachis hypogaea HOM05D007835 ORTHO05D008482 3.6e-10 68.6 124 41.1
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 3.6e-10 68.6 109 44.0
arahy.Tifrunner.gnm1.ann1.S4RYGS Arachis hypogaea HOM05D007835 ORTHO05D008482 6.1e-10 67.8 124 41.1
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 6.1e-10 67.8 115 40.9
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 1.0e-09 67.0 122 39.3
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 1.4e-09 66.6 136 39.0
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 1.8e-09 66.2 115 39.1
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-09 65.5 114 43.0
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-09 65.5 114 43.0
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-09 65.5 114 43.0
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.9e-09 65.1 114 42.1
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 3.9e-09 65.1 113 42.5
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 6.7e-09 64.3 114 44.7
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 6.7e-09 64.3 114 44.7
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 6.7e-09 64.3 114 42.1
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 8.8e-09 63.9 110 41.8
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.5e-08 63.2 114 41.2
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 4.3e-08 61.6 110 35.5
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 7.4e-08 60.8 113 37.2
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.3e-07 60.1 110 34.5
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 1.7e-07 59.7 119 40.3
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 4.8e-07 58.2 115 37.4
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 4.8e-07 58.2 94 42.6
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 4.8e-07 58.2 116 39.7
TWI34G1201 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 1.4e-06 56.6 108 37.0
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 3.1e-06 55.5 116 37.9
QL08p045526 Quercus lobata HOM05D007835 ORTHO05D008482 3.1e-06 55.5 110 40.9


User provided reference genes

Program Settings