Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G085866 Glycine max HOM05D000009 ORTHO05D012472 6.2e-41 170.2 80 100.0
Glyma.19G085550 Glycine max HOM05D000009 ORTHO05D000008 3.2e-29 131.3 77 80.5
Glyma.19G135400 Glycine max HOM05D000009 ORTHO05D000008 5.1e-27 124.0 80 78.8
Glyma.19G085600 Glycine max HOM05D000009 ORTHO05D000008 4.7e-20 100.9 51 92.2
Glyma.19G135800 Glycine max HOM05D000009 ORTHO05D000008 2.0e-18 95.5 55 78.2
Glyma.19G136900 Glycine max HOM05D000009 ORTHO05D000008 2.0e-18 95.5 51 86.3
Glyma.19G134300 Glycine max HOM05D000009 ORTHO05D000008 3.3e-18 94.7 53 84.9
Glyma.03G048100 Glycine max HOM05D000009 ORTHO05D000008 4.4e-18 94.4 53 84.9
Glyma.19G134100 Glycine max HOM05D000009 ORTHO05D000008 9.7e-18 93.2 53 84.9
Phvul.007G254400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.2e-17 92.0 74 60.8
Glyma.19G137200 Glycine max HOM05D000009 ORTHO05D000008 3.7e-17 91.3 51 80.4
Ca_22415_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.1e-16 89.7 77 54.5
Glyma.19G135500 Glycine max HOM05D000009 ORTHO05D000008 1.4e-16 89.4 52 82.7
VMungo1383G0790 Vigna mungo HOM05D000009 ORTHO05D000008 1.8e-16 89.0 72 59.7
Glyma.03G048200 Glycine max HOM05D000009 ORTHO05D000008 2.4e-16 88.6 52 78.8
Glyma.19G135700 Glycine max HOM05D000009 ORTHO05D000008 5.3e-16 87.4 51 80.4
Glyma.19G135600 Glycine max HOM05D000009 ORTHO05D000008 1.2e-15 86.3 53 77.4
TPR.G25167 Trifolium pratense HOM05D000009 ORTHO05D012472 1.3e-14 82.8 79 54.4
VMungo0720G1666 Vigna mungo HOM05D000009 ORTHO05D000008 1.3e-14 82.8 76 53.9
Phvul.007G254900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.9e-14 81.6 76 52.6
MD14G1072100 Malus domestica HOM05D000009 ORTHO05D000008 8.5e-14 80.1 76 47.4
Medtr4g119195 Medicago truncatula HOM05D000009 ORTHO05D000008 1.1e-13 79.7 76 48.7
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.5e-13 79.3 77 46.8
Ca_05421_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 5.5e-13 77.4 76 48.7
Phvul.001G134300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 9.4e-13 76.6 54 66.7
VMungo1383G3390 Vigna mungo HOM05D000009 ORTHO05D000008 3.6e-12 74.7 54 63.0
VMungo0381G0001 Vigna mungo HOM05D000009 ORTHO05D000008 8.0e-12 73.6 54 64.8
VMungo1383G1410 Vigna mungo HOM05D000009 ORTHO05D000008 1.0e-11 73.2 53 66.0
Ca_08437_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 5.2e-11 70.9 79 43.0
VMungo1383G1453 Vigna mungo HOM05D000009 ORTHO05D000008 5.2e-11 70.9 54 63.0
TWI38G0270 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.1e-10 69.7 77 44.2
Glyma.19G139400 Glycine max HOM05D000009 ORTHO05D000008 2.0e-10 68.9 77 40.3
VMungo1383G0812 Vigna mungo HOM05D000009 ORTHO05D000008 2.6e-10 68.6 77 41.6
TPR.G18255 Trifolium pratense HOM05D000009 ORTHO05D000008 3.3e-10 68.2 66 47.0
Phvul.001G133400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.4e-10 67.8 54 57.4
Phvul.001G132701 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.7e-10 67.4 77 41.6
Thecc.05G219400 Theobroma cacao HOM05D000009 ORTHO05D000008 7.5e-10 67.0 75 49.3
Phvul.001G132800 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.3e-09 66.2 77 40.3
Phvul.001G132864 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.3e-09 66.2 77 40.3
Glyma.11G212800 Glycine max HOM05D000009 ORTHO05D000008 1.7e-09 65.9 59 50.8
Lalb_Chr20g0110661 Lupinus albus HOM05D000009 ORTHO05D000008 1.7e-09 65.9 54 55.6
Medtr1g047870 Medicago truncatula HOM05D000009 ORTHO05D000008 1.7e-09 65.9 69 43.5
VMungo0720G3017 Vigna mungo HOM05D000009 ORTHO05D000008 1.7e-09 65.9 76 44.7
arahy.Tifrunner.gnm1.ann1.WRA2D9 Arachis hypogaea HOM05D000009 ORTHO05D000008 2.8e-09 65.1 78 48.7
Ca_08435_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.8e-09 65.1 67 44.8
Ca_10002_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 2.8e-09 65.1 67 44.8
Hma1.2p1_1755F.1_g300960 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.8e-09 65.1 77 44.2
Lalb_Chr04g0256361 Lupinus albus HOM05D000009 ORTHO05D000008 2.8e-09 65.1 54 57.4
Medtr5g076840 Medicago truncatula HOM05D000009 ORTHO05D000008 2.8e-09 65.1 51 58.8
Medtr7g091140 Medicago truncatula HOM05D000009 ORTHO05D000008 2.8e-09 65.1 77 40.3
Medtr1g078490 Medicago truncatula HOM05D000009 ORTHO05D000008 3.7e-09 64.7 54 53.7
TPR.G40410 Trifolium pratense HOM05D000009 ORTHO05D000008 3.7e-09 64.7 54 53.7
Phvul.001G132632 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.8e-09 64.3 61 47.5
Lalb_Chr20g0110671 Lupinus albus HOM05D000009 ORTHO05D000008 6.3e-09 63.9 54 55.6
TPR.G26700 Trifolium pratense HOM05D022962 ORTHO05D012472 8.2e-09 63.5 52 51.9
Hma1.2p1_1250F.1_g270280 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.1e-08 63.2 77 42.9
CANSAT80G2800 Cannabis sativa HOM05D000009 ORTHO05D000008 1.4e-08 62.8 76 40.8
Phvul.007G254700 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-08 62.8 76 42.1
Dinv01264 Davidia involucrata HOM05D000009 ORTHO05D016233 1.8e-08 62.4 69 43.5
VMungo0720G1074 Vigna mungo HOM05D000009 ORTHO05D000008 1.8e-08 62.4 52 61.5
CiPaw.10G097100 Carya illinoinensis HOM05D000009 ORTHO05D000008 4.1e-08 61.2 60 46.7
Phvul.001G133101 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.1e-08 61.2 77 37.7
Glyma.19G139950 Glycine max HOM05D000009 ORTHO05D000008 5.3e-08 60.8 54 53.7
Medtr7g078640 Medicago truncatula HOM05D000009 ORTHO05D000008 5.3e-08 60.8 58 50.0
Phvul.007G254200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.3e-08 60.8 51 56.9
QL07p000724 Quercus lobata HOM05D000009 ORTHO05D000008 5.3e-08 60.8 58 50.0
VMungo0720G0680 Vigna mungo HOM05D000009 ORTHO05D000008 5.3e-08 60.8 52 51.9
VMungo0720G1745 Vigna mungo HOM05D000009 ORTHO05D000008 5.3e-08 60.8 51 58.8
Psat6g088040 Pisum sativum HOM05D000009 ORTHO05D000008 7.0e-08 60.5 54 53.7
Thecc.05G220500 Theobroma cacao HOM05D000009 ORTHO05D000008 7.0e-08 60.5 77 45.5
VMungo0720G2424 Vigna mungo HOM05D000009 ORTHO05D000008 9.1e-08 60.1 48 60.4
Hma1.2p1_0924F.1_g237240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.2e-07 59.7 77 39.0
Medtr4g052500 Medicago truncatula HOM05D005386 ORTHO05D006981 1.2e-07 59.7 52 53.8
QL07p001265 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-07 59.7 52 53.8
Ca_18293_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 1.6e-07 59.3 77 40.3
Medtr7g078300 Medicago truncatula HOM05D000009 ORTHO05D000008 1.6e-07 59.3 54 50.0
Prupe.7G062200 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-07 59.3 52 50.0
Prupe.7G062900 Prunus persica HOM05D000009 ORTHO05D000008 1.6e-07 59.3 45 51.1
Eucgr.K02012 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.0e-07 58.9 67 44.8
Hma1.2p1_1755F.1_g300990 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.0e-07 58.9 77 41.6
Prupe.7G062500 Prunus persica HOM05D000009 ORTHO05D000008 2.0e-07 58.9 53 49.1
QL02p016325 Quercus lobata HOM05D000009 ORTHO05D000008 2.0e-07 58.9 77 45.5
Thecc.05G220700 Theobroma cacao HOM05D000009 ORTHO05D000008 2.0e-07 58.9 77 44.2
Duzib128G1810 Durio zibethinus HOM05D000009 ORTHO05D000008 2.7e-07 58.5 77 46.8
QL07p004278 Quercus lobata HOM05D000009 ORTHO05D000008 2.7e-07 58.5 52 51.9
COL.COLO4_36046 Corchorus olitorius HOM05D000009 ORTHO05D000008 3.5e-07 58.2 76 42.1
MD14G1069100 Malus domestica HOM05D000009 ORTHO05D000008 4.5e-07 57.8 54 46.3
MD14G1072300 Malus domestica HOM05D000009 ORTHO05D000008 4.5e-07 57.8 53 45.3
Phvul.001G062600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.5e-07 57.8 53 56.6
Phvul.001G134000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.5e-07 57.8 55 49.1
Phvul.007G254300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.5e-07 57.8 52 55.8
Prupe.7G063800 Prunus persica HOM05D000009 ORTHO05D000008 4.5e-07 57.8 63 42.9
QL02p047554 Quercus lobata HOM05D000009 ORTHO05D000008 4.5e-07 57.8 59 49.2
RcHm_v2.0_Chr2g0117271 Rosa chinensis HOM05D000009 ORTHO05D000008 4.5e-07 57.8 64 42.2
Lalb_Chr04g0256741 Lupinus albus HOM05D000009 ORTHO05D000008 5.9e-07 57.4 54 48.1
Phvul.001G132980 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.9e-07 57.4 49 49.0
Phvul.001G133000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.9e-07 57.4 49 49.0
Thecc.05G219600 Theobroma cacao HOM05D000009 ORTHO05D000008 5.9e-07 57.4 75 46.7
TWI81G1048 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 5.9e-07 57.4 62 41.9
VMungo0720G2327 Vigna mungo HOM05D000009 ORTHO05D000008 5.9e-07 57.4 57 54.4
MD14G1070400 Malus domestica HOM05D000009 ORTHO05D000008 7.7e-07 57.0 53 45.3
PGR004G1496 Punica granatum HOM05D000009 ORTHO05D000008 7.7e-07 57.0 77 35.1
arahy.Tifrunner.gnm1.ann1.LS5HQA Arachis hypogaea HOM05D000009 ORTHO05D000008 1.0e-06 56.6 78 42.3
Eucgr.K02016 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.0e-06 56.6 63 46.0
Hma1.2p1_1041F.1_g251000 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.0e-06 56.6 72 43.1
Thecc.05G220900 Theobroma cacao HOM05D000009 ORTHO05D000008 1.0e-06 56.6 77 42.9
VMungo1383G2883 Vigna mungo HOM05D000009 ORTHO05D000008 1.0e-06 56.6 54 50.0
Migut.A00566 Erythranthe guttata HOM05D000009 ORTHO05D000008 1.3e-06 56.2 75 40.0
QL07p001125 Quercus lobata HOM05D000009 ORTHO05D000008 1.3e-06 56.2 52 50.0
arahy.Tifrunner.gnm1.ann1.DT9DNF Arachis hypogaea HOM05D000009 ORTHO05D000008 1.7e-06 55.8 67 49.3
Dinv08506 Davidia involucrata HOM05D000009 ORTHO05D000008 1.7e-06 55.8 51 52.9
Migut.A00563 Erythranthe guttata HOM05D000009 ORTHO05D000008 1.7e-06 55.8 75 40.0
Hma1.2p1_0621F.1_g190830 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.7e-06 55.8 77 40.3
QL09p049004 Quercus lobata HOM05D000009 ORTHO05D003343 1.7e-06 55.8 55 49.1
Eucgr.K01715 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.2e-06 55.5 64 45.3
PGR004G2410 Punica granatum HOM05D000009 ORTHO05D000008 2.2e-06 55.5 52 44.2
Glyma.03G137200 Glycine max HOM05D000009 ORTHO05D000008 2.9e-06 55.1 53 52.8
Medtr7g091200 Medicago truncatula HOM05D000009 ORTHO05D000008 2.9e-06 55.1 70 37.1
Medtr7g491190 Medicago truncatula HOM05D000009 ORTHO05D000008 2.9e-06 55.1 70 37.1
QL07p000998 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-06 55.1 49 51.0
QL07p001317 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-06 55.1 52 51.9
RcHm_v2.0_Chr2g0117561 Rosa chinensis HOM05D000009 ORTHO05D000008 2.9e-06 55.1 65 44.6
Sed0020229 Sechium edule HOM05D000009 ORTHO05D025101 2.9e-06 55.1 79 39.2
GSVIVG01020306001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.9e-06 55.1 75 33.3
Haze_19833 Corylus avellana HOM05D000009 ORTHO05D000008 3.8e-06 54.7 52 50.0
Duzib128G1111 Durio zibethinus HOM05D000009 ORTHO05D000008 3.8e-06 54.7 78 41.0
Prupe.7G062800 Prunus persica HOM05D000009 ORTHO05D000008 3.8e-06 54.7 52 48.1
TWI32G0243 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 3.8e-06 54.7 44 54.5
FAN14G2592 Fragaria x ananassa HOM05D000009 ORTHO05D000008 5.0e-06 54.3 64 42.2
Glyma.19G139600 Glycine max HOM05D000009 ORTHO05D000008 5.0e-06 54.3 52 48.1
Gohir.D03G053160 Gossypium hirsutum HOM05D000009 ORTHO05D000008 5.0e-06 54.3 68 45.6
Lj5C512T4 Lonicera japonica HOM05D000009 ORTHO05D000008 5.0e-06 54.3 68 36.8
Medtr7g091560 Medicago truncatula HOM05D000009 ORTHO05D000008 5.0e-06 54.3 65 38.5
EL10Ac6g14531 Beta vulgaris HOM05D000009 ORTHO05D000008 6.5e-06 53.9 76 35.5
CiPaw.10G100600 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.5e-06 53.9 54 44.4
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 6.5e-06 53.9 51 47.1
Haze_19835 Corylus avellana HOM05D000009 ORTHO05D000008 6.5e-06 53.9 52 51.9
FvH4_6g51570 Fragaria vesca HOM05D000009 ORTHO05D000008 6.5e-06 53.9 64 39.1
FAN05G3858 Fragaria x ananassa HOM05D000009 ORTHO05D000008 6.5e-06 53.9 64 42.2
Hma1.2p1_0924F.1_g237170 Hydrangea macrophylla HOM05D000009 ORTHO05D036403 6.5e-06 53.9 77 39.0
Hma1.2p1_1755F.1_g301010 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.5e-06 53.9 77 39.0
Atru.chr1.3962 Acer truncatum HOM05D000009 ORTHO05D000008 8.5e-06 53.5 81 40.7
FAN02G0737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 8.5e-06 53.5 64 40.6
Glyma.02G184300 Glycine max HOM05D000009 ORTHO05D000008 8.5e-06 53.5 52 50.0
Glyma.03G135900 Glycine max HOM05D000009 ORTHO05D000008 8.5e-06 53.5 53 47.2
QL07p004202 Quercus lobata HOM05D000009 ORTHO05D000008 8.5e-06 53.5 44 54.5
VMungo0720G3114 Vigna mungo HOM05D033658 ORTHO05D012472 8.5e-06 53.5 40 60.0


User provided reference genes

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