Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G074800 Glycine max HOM05D010343 ORTHO05D011300 3.8e-84 314.7 150 100.0
Glyma.01G096200 Glycine max HOM05D000535 ORTHO05D011300 2.7e-45 185.7 141 66.0
Glyma.08G341500 Glycine max HOM05D010343 ORTHO05D011300 2.4e-38 162.5 146 58.9
Glyma.08G341700 Glycine max HOM05D000535 ORTHO05D011300 1.3e-36 156.8 141 58.9
Glyma.08G342000 Glycine max HOM05D000535 ORTHO05D011300 6.7e-36 154.5 138 55.8
Glyma.01G095000 Glycine max HOM05D000535 ORTHO05D011300 3.8e-31 138.7 128 59.4
Glyma.08G342100 Glycine max HOM05D010343 ORTHO05D011300 1.8e-28 129.8 145 52.4
Glyma.08G341800 Glycine max HOM05D010343 ORTHO05D011300 6.7e-28 127.9 145 51.7
Glyma.08G341300 Glycine max HOM05D000535 ORTHO05D011300 1.1e-22 110.5 127 52.8
Glyma.08G341400 Glycine max HOM05D000535 ORTHO05D011300 5.1e-20 101.7 129 46.5
arahy.Tifrunner.gnm1.ann1.Q36S6K Arachis hypogaea HOM05D000535 ORTHO05D011300 1.3e-18 97.1 125 41.6
Glyma.18G191400 Glycine max HOM05D010343 ORTHO05D011300 1.3e-18 97.1 114 43.9
Phvul.008G113100 Phaseolus vulgaris HOM05D010343 ORTHO05D011300 1.3e-18 97.1 128 39.8
VMungo1383G2316 Vigna mungo HOM05D010343 ORTHO05D011300 3.7e-18 95.5 110 43.6
arahy.Tifrunner.gnm1.ann1.TZ4EFW Arachis hypogaea HOM05D000535 ORTHO05D011300 1.4e-17 93.6 125 40.8
Glyma.08G342300 Glycine max HOM05D000535 ORTHO05D011300 4.5e-16 88.6 110 50.9
VMungo0464G1765 Vigna mungo HOM05D010343 ORTHO05D011300 1.6e-13 80.1 148 35.8
Glyma.01G095232 Glycine max HOM05D010343 ORTHO05D011300 7.9e-13 77.8 128 40.6
VMungo0464G1354 Vigna mungo HOM05D010343 ORTHO05D011300 5.1e-12 75.1 129 37.2
Glyma.08G342200 Glycine max HOM05D000535 ORTHO05D011300 9.7e-11 70.9 140 37.9
VMungo1383G1409 Vigna mungo HOM05D010343 ORTHO05D011300 2.2e-10 69.7 146 33.6
Glyma.08G341600 Glycine max HOM05D010343 ORTHO05D011300 2.4e-09 66.2 124 37.1
VMungo1383G2334 Vigna mungo HOM05D010343 ORTHO05D011300 9.1e-09 64.3 127 30.7
Glyma.08G341000 Glycine max HOM05D000535 ORTHO05D011300 1.5e-08 63.5 113 37.2
Cc00_g04330 Coffea canephora HOM05D000535 ORTHO05D000427 3.4e-08 62.4 111 39.6
BcaB03g15038 Brassica carinata HOM05D000535 ORTHO05D000427 5.9e-08 61.6 127 29.9
Cc10_g11720 Coffea canephora HOM05D000535 ORTHO05D000427 5.9e-08 61.6 111 35.1
VMungo1383G2806 Vigna mungo HOM05D010343 ORTHO05D011300 7.7e-08 61.2 113 38.1
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 1.3e-07 60.5 110 35.5
BcaB03g15044 Brassica carinata HOM05D000535 ORTHO05D000427 1.7e-07 60.1 125 29.6
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 1.7e-07 60.1 97 40.2
VMungo1383G0200 Vigna mungo HOM05D010343 ORTHO05D011300 1.7e-07 60.1 128 35.9
BraA07t30625Z Brassica rapa HOM05D000535 ORTHO05D000427 2.2e-07 59.7 129 33.3
AT1G73325 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 2.9e-07 59.3 66 39.4
BolC6t39791H Brassica oleracea HOM05D000535 ORTHO05D009010 2.9e-07 59.3 66 37.9
Sp5g28260 Schrenkiella parvula HOM05D000535 ORTHO05D009010 2.9e-07 59.3 66 37.9
BolC6t38525H Brassica oleracea HOM05D000535 ORTHO05D000427 3.8e-07 58.9 129 33.3
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 3.8e-07 58.9 137 35.0
BcaB03g15702 Brassica carinata HOM05D000535 ORTHO05D000427 5.0e-07 58.5 129 32.6
BcaC08g45653 Brassica carinata HOM05D000535 ORTHO05D000427 5.0e-07 58.5 129 33.3
C06p34110 Brassica napus HOM05D000535 ORTHO05D000427 5.0e-07 58.5 129 33.3
Glyma.08G341100 Glycine max HOM05D000535 ORTHO05D011300 5.0e-07 58.5 106 39.6
AT1G73260 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 6.5e-07 58.2 136 34.6
HanXRQChr14g0444671 Helianthus annuus HOM05D000535 ORTHO05D000427 8.5e-07 57.8 113 39.8
BcaC08g46756 Brassica carinata HOM05D000535 ORTHO05D009010 1.1e-06 57.4 66 37.9
BraA07t31473Z Brassica rapa HOM05D000535 ORTHO05D000427 1.1e-06 57.4 120 30.8
A07p39300 Brassica napus HOM05D000535 ORTHO05D009010 1.4e-06 57.0 66 39.4
BraA07t31479Z Brassica rapa HOM05D000535 ORTHO05D009010 1.4e-06 57.0 66 39.4
ECA246G5188 Erigeron canadensis HOM05D000535 ORTHO05D000427 1.4e-06 57.0 63 47.6
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 1.9e-06 56.6 110 39.1
Duzib128G1043 Durio zibethinus HOM05D000535 ORTHO05D000427 3.2e-06 55.8 72 43.1
Potri.004G067900 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.2e-06 55.8 110 39.1
Actinidia26771 Actinidia chinensis HOM05D000535 ORTHO05D000427 4.2e-06 55.5 132 33.3
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 4.2e-06 55.5 123 32.5
BcaB03g15050 Brassica carinata HOM05D000535 ORTHO05D000427 4.2e-06 55.5 66 37.9
BcaB03g15703 Brassica carinata HOM05D000535 ORTHO05D000427 4.2e-06 55.5 129 32.6
BcaB03g15704 Brassica carinata HOM05D000535 ORTHO05D000427 4.2e-06 55.5 129 32.6
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 4.2e-06 55.5 72 43.1
Gohir.D04G025000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 4.2e-06 55.5 72 43.1
Gorai.012G027600 Gossypium raimondii HOM05D000535 ORTHO05D000427 4.2e-06 55.5 72 43.1
Lsat_1_v5_gn_3_3380 Lactuca sativa HOM05D000535 ORTHO05D000427 5.5e-06 55.1 77 40.3
C06p47530 Brassica napus HOM05D000535 ORTHO05D009010 7.2e-06 54.7 66 36.4
HanXRQChr05g0161361 Helianthus annuus HOM05D000535 ORTHO05D000427 7.2e-06 54.7 63 49.2
HanXRQChr14g0444681 Helianthus annuus HOM05D000535 ORTHO05D000427 7.2e-06 54.7 123 35.8
Sabra04G0045300 Salix brachista HOM05D000535 ORTHO05D000427 9.4e-06 54.3 62 50.0
Sabra17G0125900 Salix brachista HOM05D000535 ORTHO05D000427 9.4e-06 54.3 127 37.0


User provided reference genes

Program Settings