Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G071400 Glycine max HOM05D001694 ORTHO05D000248 1.4e-33 145.6 69 100.0
VMungo1383G0869 Vigna mungo HOM05D001694 ORTHO05D000248 7.1e-09 63.5 49 59.2
Phvul.001G254400 Phaseolus vulgaris HOM05D001694 ORTHO05D000248 1.2e-08 62.8 49 59.2
arahy.Tifrunner.gnm1.ann1.A7JCH7 Arachis hypogaea HOM05D001694 ORTHO05D000248 2.1e-08 62.0 49 59.2
Ca_16504_v3 Cicer arietinum L. HOM05D001694 ORTHO05D000248 2.1e-08 62.0 49 59.2
Ca_30636_v3 Cicer arietinum L. HOM05D001694 ORTHO05D000248 2.1e-08 62.0 49 59.2
Glyma.18G014400 Glycine max HOM05D001694 ORTHO05D000248 2.1e-08 62.0 49 59.2
Medtr3g086750 Medicago truncatula HOM05D001694 ORTHO05D000248 2.1e-08 62.0 49 59.2
TPR.G30526 Trifolium pratense HOM05D001694 ORTHO05D000248 3.5e-08 61.2 48 60.4
Lj6g0003259 Lotus japonicus HOM05D001694 ORTHO05D000248 7.9e-08 60.1 49 57.1
Lj6g0010163 Lotus japonicus HOM05D001694 ORTHO05D000248 7.9e-08 60.1 49 57.1
arahy.Tifrunner.gnm1.ann1.I0F6BN Arachis hypogaea HOM05D001694 ORTHO05D000248 1.0e-07 59.7 49 57.1
CiPaw.01G048900 Carya illinoinensis HOM05D001694 ORTHO05D000248 1.3e-07 59.3 49 55.1
PGR004G1918 Punica granatum HOM05D001694 ORTHO05D000248 1.3e-07 59.3 49 55.1
QL06p047886 Quercus lobata HOM05D001694 ORTHO05D000248 2.3e-07 58.5 49 55.1
Cpa.g.sc55.63 Carica papaya HOM05D001694 ORTHO05D000248 6.7e-07 57.0 49 55.1
Gohir.D03G041100 Gossypium hirsutum HOM05D001694 ORTHO05D000248 8.7e-07 56.6 49 53.1
SalBow5G4335 Salvia bowleyana HOM05D001694 ORTHO05D000248 8.7e-07 56.6 49 53.1
Gohir.A02G130200 Gossypium hirsutum HOM05D001694 ORTHO05D000248 1.1e-06 56.2 49 53.1
Gorai.003G041900 Gossypium raimondii HOM05D001694 ORTHO05D000248 1.1e-06 56.2 49 53.1
Cfa004372 Carpinus fangiana HOM05D001694 ORTHO05D000248 1.9e-06 55.5 49 51.0
Eucgr.I00543 Eucalyptus grandis HOM05D001694 ORTHO05D000248 1.9e-06 55.5 49 53.1
TAR381G0596 Trochodendron aralioides HOM05D001694 ORTHO05D000248 1.9e-06 55.5 49 53.1
Actinidia01864 Actinidia chinensis HOM05D001694 ORTHO05D000248 2.5e-06 55.1 30 80.0
Actinidia06532 Actinidia chinensis HOM05D001694 ORTHO05D000248 2.5e-06 55.1 49 53.1
DCAR_003459 Daucus carota HOM05D001694 ORTHO05D000248 2.5e-06 55.1 49 53.1
CANSAT01G2340 Cannabis sativa HOM05D001694 ORTHO05D000248 3.3e-06 54.7 48 52.1
Cc07_g14490 Coffea canephora HOM05D001694 ORTHO05D000248 3.3e-06 54.7 49 53.1
Manes.12G129400 Manihot esculenta HOM05D001694 ORTHO05D000248 3.3e-06 54.7 49 53.1
vmacro22665 Vaccinium macrocarpon HOM05D001694 ORTHO05D000248 3.3e-06 54.7 49 55.1
HanXRQChr12g0381021 Helianthus annuus HOM05D001694 ORTHO05D000248 4.3e-06 54.3 48 54.2
PSO017G7391 Papaver somniferum HOM05D001694 ORTHO05D000248 4.3e-06 54.3 46 52.2
THA.LOC104801684 Tarenaya hassleriana HOM05D001694 ORTHO05D000248 4.3e-06 54.3 49 51.0
Ciclev10025463m.g Citrus clementina HOM05D001694 ORTHO05D000248 5.6e-06 53.9 48 54.2
Haze_15040 Corylus avellana HOM05D001694 ORTHO05D000248 5.6e-06 53.9 49 49.0
PSO541G3263 Papaver somniferum HOM05D001694 ORTHO05D000248 5.6e-06 53.9 49 53.1
Rhsim10G0169400 Rhododendron simsii HOM05D001694 ORTHO05D000248 5.6e-06 53.9 49 53.1
Hund16550 Selenicereus undatus HOM05D001694 ORTHO05D000248 5.6e-06 53.9 46 54.3
Thecc.01G094700 Theobroma cacao HOM05D001694 ORTHO05D000248 5.6e-06 53.9 49 51.0
Aqoxy6G00696 Aquilegia oxysepala HOM05D001694 ORTHO05D000248 7.4e-06 53.5 29 79.3
Dinv08875 Davidia involucrata HOM05D001694 ORTHO05D000248 7.4e-06 53.5 49 51.0
Duzib147G1577 Durio zibethinus HOM05D001694 ORTHO05D000248 7.4e-06 53.5 49 51.0
MD15G1317300 Malus domestica HOM05D001694 ORTHO05D000248 9.6e-06 53.1 48 52.1
Nn5g29975 Nelumbo nucifera HOM05D001694 ORTHO05D000248 9.6e-06 53.1 48 52.1
Sabra07G0007600 Salix brachista HOM05D001694 ORTHO05D000248 9.6e-06 53.1 49 51.0


User provided reference genes

Program Settings