Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G066600 Glycine max HOM05D000585 ORTHO05D213321 3.8e-114 414.8 210 100.0
Glyma.01G217200 Glycine max HOM05D000585 ORTHO05D001977 3.7e-24 115.9 176 48.3
Phvul.002G154900 Phaseolus vulgaris HOM05D000585 ORTHO05D001977 8.8e-18 94.7 116 55.2
arahy.Tifrunner.gnm1.ann1.N1MEI5 Arachis hypogaea HOM05D000585 ORTHO05D001977 1.7e-13 80.5 101 49.5
arahy.Tifrunner.gnm1.ann1.15AHFL Arachis hypogaea HOM05D000585 ORTHO05D001977 1.2e-11 74.3 143 40.6
arahy.Tifrunner.gnm1.ann1.3C7G22 Arachis hypogaea HOM05D000585 ORTHO05D001977 1.2e-11 74.3 143 40.6
VMungo1215G1184 Vigna mungo HOM05D000585 ORTHO05D001977 1.2e-11 74.3 223 37.2
Glyma.05G049000 Glycine max HOM05D000585 ORTHO05D001977 6.1e-11 72.0 98 51.0
VMungo1215G2134 Vigna mungo HOM05D000585 ORTHO05D001977 6.1e-11 72.0 129 43.4
Phvul.003G211800 Phaseolus vulgaris HOM05D000585 ORTHO05D001977 7.9e-11 71.6 103 52.4
Lj2g0006341 Lotus japonicus HOM05D000585 ORTHO05D001977 5.1e-10 68.9 138 39.9
Haze_08935 Corylus avellana HOM05D000585 ORTHO05D001977 8.8e-10 68.2 149 37.6
Cfa012115 Carpinus fangiana HOM05D000585 ORTHO05D001977 3.3e-09 66.2 88 50.0
Solyc08g080470.3 Solanum lycopersicum HOM05D000585 ORTHO05D001977 3.3e-09 66.2 150 32.0
PGSC0003DMG400003036 Solanum tuberosum HOM05D000585 ORTHO05D001977 3.3e-09 66.2 114 36.8
Glyma.17G130900 Glycine max HOM05D000585 ORTHO05D001977 5.7e-09 65.5 84 52.4
Sopen08g028790 Solanum pennellii HOM05D000585 ORTHO05D001977 7.4e-09 65.1 123 35.0
Medtr4g102840 Medicago truncatula HOM05D000585 ORTHO05D001977 9.7e-09 64.7 126 41.3
TAR374G1346 Trochodendron aralioides HOM05D000585 ORTHO05D001977 1.7e-08 63.9 125 40.0
Lalb_Chr09g0333261 Lupinus albus HOM05D000585 ORTHO05D001977 2.2e-08 63.5 74 54.1
CiPaw.11G140100 Carya illinoinensis HOM05D000585 ORTHO05D001977 4.8e-08 62.4 135 40.0
Ca_26107_v3 Cicer arietinum L. HOM05D000585 ORTHO05D001977 4.8e-08 62.4 131 41.2
Lj4g0001428 Lotus japonicus HOM05D000585 ORTHO05D001977 4.8e-08 62.4 128 38.3
Nitab4.5_0001200g0140 Nicotiana tabacum HOM05D000585 ORTHO05D001977 4.8e-08 62.4 138 39.1
Nitab4.5_0002234g0020 Nicotiana tabacum HOM05D000585 ORTHO05D001977 6.3e-08 62.0 115 36.5
QL12p017496 Quercus lobata HOM05D000585 ORTHO05D001977 6.3e-08 62.0 127 38.6
TPR.G19219 Trifolium pratense HOM05D000585 ORTHO05D001977 6.3e-08 62.0 100 46.0
Actinidia02035 Actinidia chinensis HOM05D000585 ORTHO05D001977 1.1e-07 61.2 84 50.0
Cpa.g.sc74.72 Carica papaya HOM05D000585 ORTHO05D001977 1.1e-07 61.2 87 43.7
Peaxi162Scf00102g01416 Petunia axillaris HOM05D000585 ORTHO05D001977 1.1e-07 61.2 84 50.0
Nitab4.5_0000264g0050 Nicotiana tabacum HOM05D000585 ORTHO05D001977 1.4e-07 60.8 102 41.2
GSVIVG01019823001 Vitis vinifera HOM05D000585 ORTHO05D001977 1.4e-07 60.8 111 40.5
Nitab4.5_0007404g0010 Nicotiana tabacum HOM05D000585 ORTHO05D001977 1.8e-07 60.5 115 35.7
Peaxi162Scf00714g00435 Petunia axillaris HOM05D000585 ORTHO05D001977 3.1e-07 59.7 115 35.7
Dinv39000 Davidia involucrata HOM05D000585 ORTHO05D001977 4.1e-07 59.3 89 48.3
Nitab4.5_0007065g0010 Nicotiana tabacum HOM05D000585 ORTHO05D001977 5.3e-07 58.9 99 43.4
CSS0029012 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D001977 7.0e-07 58.5 137 35.8
FAN18G2193 Fragaria x ananassa HOM05D000585 ORTHO05D001977 9.1e-07 58.2 121 38.0
MD04G1065600 Malus domestica HOM05D000585 ORTHO05D001977 9.1e-07 58.2 127 35.4
Prupe.5G092600 Prunus persica HOM05D000585 ORTHO05D001977 9.1e-07 58.2 114 37.7
CSS0013215 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D001977 1.2e-06 57.8 137 37.2
CAN.G981.19 Capsicum annuum HOM05D000585 ORTHO05D001977 1.5e-06 57.4 115 34.8
FAN08G2231 Fragaria x ananassa HOM05D000585 ORTHO05D001977 1.5e-06 57.4 121 38.0
PGSC0003DMG400005774 Solanum tuberosum HOM05D000585 ORTHO05D001977 1.5e-06 57.4 93 41.9
Psat4g067800 Pisum sativum HOM05D000585 ORTHO05D001977 2.0e-06 57.0 127 40.9
Gohir.D03G153800 Gossypium hirsutum HOM05D000585 ORTHO05D001977 5.9e-06 55.5 79 49.4
SalBow6G1036 Salvia bowleyana HOM05D000585 ORTHO05D001977 5.9e-06 55.5 84 44.0
FvH4_5g01680 Fragaria vesca HOM05D000585 ORTHO05D001977 7.7e-06 55.1 121 37.2
TAR636G1958 Trochodendron aralioides HOM05D000585 ORTHO05D001977 7.7e-06 55.1 136 34.6


User provided reference genes

Program Settings