Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 9.4e-62 240.0 117 100.0
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.2e-58 228.8 117 95.7
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.5e-54 215.3 117 91.5
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 2.8e-50 201.8 118 85.6
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.1e-46 189.9 108 88.0
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.9e-46 189.1 119 81.5
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 1.4e-44 183.0 129 76.7
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 7.5e-43 177.2 117 74.4
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 4.8e-42 174.5 117 75.2
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 1.1e-41 173.3 113 76.1
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 5.4e-41 171.0 117 70.9
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 9.1e-41 170.2 117 70.9
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 9.1e-41 170.2 117 70.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.6e-40 169.5 117 70.1
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.6e-40 169.5 108 77.8
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.0e-40 169.1 117 71.8
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 2.0e-40 169.1 118 72.9
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.0e-40 169.1 108 77.8
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 2.0e-40 169.1 108 77.8
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.7e-40 168.7 108 76.9
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.7e-40 168.7 125 71.2
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 5.9e-40 167.5 117 72.6
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 7.7e-40 167.2 117 73.5
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 7.7e-40 167.2 112 72.3
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.0e-39 166.8 117 70.1
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.7e-39 166.0 110 72.7
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.7e-39 166.0 117 70.1
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 5.0e-39 164.5 99 79.8
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 6.6e-39 164.1 111 72.1
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 6.6e-39 164.1 99 77.8
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 8.6e-39 163.7 105 75.2
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.5e-38 162.9 108 72.2
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 2.5e-38 162.2 94 83.0
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.5e-38 162.2 99 78.8
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 3.3e-38 161.8 117 70.1
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 5.5e-38 161.0 109 72.5
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 5.5e-38 161.0 99 77.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 5.5e-38 161.0 99 77.8
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 7.2e-38 160.6 81 91.4
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 7.2e-38 160.6 81 91.4
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 7.2e-38 160.6 108 74.1
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 7.2e-38 160.6 109 68.8
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 9.5e-38 160.2 102 75.5
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.2e-37 159.8 92 80.4
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.2e-37 159.8 117 69.2
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 2.1e-37 159.1 94 79.8
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.8e-37 158.7 99 76.8
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 2.8e-37 158.7 117 68.4
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.6e-37 158.3 111 69.4
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 3.6e-37 158.3 124 71.8
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 3.6e-37 158.3 112 70.5
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 6.1e-37 157.5 99 76.8
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 6.1e-37 157.5 108 73.1
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 8.0e-37 157.1 99 72.7
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 8.0e-37 157.1 94 78.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.0e-36 156.8 111 68.5
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.0e-36 156.8 94 77.7
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.0e-36 156.8 101 74.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.4e-36 156.4 99 75.8
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.4e-36 156.4 99 75.8
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.4e-36 156.4 99 75.8
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.4e-36 156.4 99 75.8
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.4e-36 156.4 99 75.8
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.4e-36 156.4 92 78.3
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 3.0e-36 155.2 94 76.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 4.0e-36 154.8 109 69.7
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 5.2e-36 154.5 94 77.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 5.2e-36 154.5 104 72.1
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 6.8e-36 154.1 99 74.7
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 6.8e-36 154.1 99 74.7
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 6.8e-36 154.1 99 74.7
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 6.8e-36 154.1 99 74.7
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 6.8e-36 154.1 99 74.7
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 6.8e-36 154.1 96 77.1
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.5e-35 152.9 112 67.9
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.5e-35 152.9 94 73.4
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.0e-35 152.5 126 62.7
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 2.0e-35 152.5 117 64.1
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 2.0e-35 152.5 101 71.3
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.0e-35 152.5 99 73.7
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 2.0e-35 152.5 117 65.0
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 4.4e-35 151.4 117 64.1
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.3e-34 149.8 95 78.9
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 2.8e-34 148.7 108 66.7
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 4.9e-34 147.9 117 64.1
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.8e-33 146.0 81 81.5
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.2e-29 133.3 104 62.5
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.4e-28 129.8 97 60.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 5.2e-28 127.9 94 70.2
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.9e-28 127.1 100 58.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 4.4e-27 124.8 87 70.1
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.4e-25 119.8 92 67.4
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.3e-23 113.2 64 87.5
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 2.3e-23 112.5 90 53.3
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 5.0e-23 111.3 82 59.8
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 2.8e-21 105.5 60 83.3
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.8e-21 105.5 91 57.1
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 2.0e-19 99.4 58 84.5
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.2e-18 95.9 77 54.5
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 3.4e-11 72.0 93 32.3
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 1.7e-07 59.7 78 35.9
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.5e-06 56.6 32 75.0


User provided reference genes

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