Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 6.9e-60 233.8 120 100.0
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 1.0e-47 193.4 124 84.7
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 2.6e-35 152.1 128 70.3
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 3.0e-31 138.7 128 64.8
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 2.2e-26 122.5 127 64.6
Ca_11155_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.2e-24 116.7 130 58.5
Ca_11158_v3 Cicer arietinum L. HOM05D007617 ORTHO05D007195 1.2e-24 116.7 130 58.5
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.6e-24 116.3 131 59.5
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 9.1e-20 100.5 130 53.1
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.2e-19 100.1 129 56.6
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 2.7e-19 99.0 131 55.0
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 3.5e-19 98.6 138 55.1
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.8e-15 86.3 134 49.3
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 1.3e-13 80.1 138 44.9
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 3.7e-13 78.6 138 45.7
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 6.3e-13 77.8 139 46.0
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 6.3e-13 77.8 139 46.0
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 1.4e-12 76.6 140 47.9
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.4e-12 76.6 138 42.8
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 3.1e-12 75.5 136 46.3
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 3.1e-12 75.5 128 45.3
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 4.1e-12 75.1 141 44.7
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 7.0e-12 74.3 136 46.3
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 5.9e-11 71.2 140 43.6
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 5.9e-11 71.2 131 42.7
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 2.3e-10 69.3 65 60.0
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.3e-10 69.3 65 60.0
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.3e-10 69.3 65 60.0
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 6.6e-10 67.8 143 42.0
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 8.6e-10 67.4 124 41.9
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 1.5e-09 66.6 133 42.1
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 2.5e-09 65.9 131 39.7
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 2.5e-09 65.9 150 38.7
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 7.2e-09 64.3 130 41.5
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 7.2e-09 64.3 136 39.7
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 1.2e-08 63.5 131 42.7
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 1.6e-08 63.2 130 40.8
Migut.K00629 Erythranthe guttata HOM05D007617 ORTHO05D007195 1.6e-08 63.2 133 41.4
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 1.6e-08 63.2 138 37.7
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 2.1e-08 62.8 140 41.4
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 3.6e-08 62.0 65 56.9
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 4.7e-08 61.6 86 50.0
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 4.7e-08 61.6 144 41.0
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 1.4e-07 60.1 140 40.7
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.8e-07 59.7 144 41.0
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.3e-07 59.3 127 40.9
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 3.0e-07 58.9 132 38.6
Rhsim08G0047600 Rhododendron simsii HOM05D007617 ORTHO05D007195 4.0e-07 58.5 126 41.3
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 4.0e-07 58.5 127 40.9
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 8.9e-07 57.4 105 43.8
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 8.9e-07 57.4 123 39.0
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 8.9e-07 57.4 138 41.3
Manes.15G153500 Manihot esculenta HOM05D007617 ORTHO05D007195 2.0e-06 56.2 140 38.6
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 2.6e-06 55.8 128 43.0
SGA_v2.0_scaffold30G12404 Striga asiatica HOM05D007617 ORTHO05D007195 3.4e-06 55.5 128 40.6
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 4.4e-06 55.1 124 39.5
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 4.4e-06 55.1 121 39.7
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 7.5e-06 54.3 151 35.1
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 7.5e-06 54.3 143 41.3
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 9.8e-06 53.9 66 53.0
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 9.8e-06 53.9 126 40.5
SGA_v2.0_scaffold47G17524 Striga asiatica HOM05D007617 ORTHO05D007195 9.8e-06 53.9 128 40.6


User provided reference genes

Program Settings