Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G040700 Glycine max HOM05D000912 ORTHO05D001232 1.7e-207 725.7 352 100.0
Glyma.19G044000 Glycine max HOM05D000912 ORTHO05D001232 1.8e-172 609.4 346 87.6
Lj2g0027369 Lotus japonicus HOM05D000912 ORTHO05D001232 4.7e-32 142.9 347 31.1
VMungo1215G2223 Vigna mungo HOM05D000912 ORTHO05D001232 1.1e-28 131.7 235 40.4
Lj5g0012560 Lotus japonicus HOM05D000912 ORTHO05D001232 1.4e-23 114.8 341 31.1
TPR.G9664 Trifolium pratense HOM05D000912 ORTHO05D001232 5.8e-22 109.4 326 31.6
arahy.Tifrunner.gnm1.ann1.9W5653 Arachis hypogaea HOM05D000912 ORTHO05D001232 9.8e-22 108.6 351 28.5
Lj5g0024613 Lotus japonicus HOM05D000912 ORTHO05D001232 2.9e-21 107.1 341 29.9
Ca_26347_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 2.5e-17 94.0 328 29.6
arahy.Tifrunner.gnm1.ann1.6WKR13 Arachis hypogaea HOM05D000912 ORTHO05D001232 3.6e-16 90.1 164 36.0
Medtr3g101100 Medicago truncatula HOM05D000912 ORTHO05D001232 1.1e-15 88.6 312 30.4
Medtr3g107960 Medicago truncatula HOM05D000912 ORTHO05D001232 4.4e-14 83.2 331 29.0
Ca_26250_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 5.8e-14 82.8 306 30.1
TPR.G39862 Trifolium pratense HOM05D000912 ORTHO05D001232 7.5e-14 82.4 329 28.0
RcHm_v2.0_Chr2g0163411 Rosa chinensis HOM05D000912 ORTHO05D001232 2.5e-09 67.4 336 25.6
Manes.01G107500 Manihot esculenta HOM05D000912 ORTHO05D001232 3.6e-08 63.5 143 33.6
Potri.004G104201 Populus trichocarpa HOM05D000912 ORTHO05D001232 1.8e-07 61.2 136 31.6
TPR.G19978 Trifolium pratense HOM05D000912 ORTHO05D001232 2.3e-07 60.8 118 35.6
Sabra04G0077300 Salix brachista HOM05D000912 ORTHO05D001232 5.2e-07 59.7 225 28.0
Prupe.3G240900 Prunus persica HOM05D000912 ORTHO05D001232 1.5e-06 58.2 114 38.6
MD17G1073200 Malus domestica HOM05D000912 ORTHO05D001232 3.4e-06 57.0 350 25.4
FAN02G3487 Fragaria x ananassa HOM05D000912 ORTHO05D001232 4.4e-06 56.6 111 32.4
FAN14G3458 Fragaria x ananassa HOM05D000912 ORTHO05D001232 9.9e-06 55.5 206 29.1


User provided reference genes

Program Settings