Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 1.3e-80 303.1 173 100.0
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 2.9e-67 258.8 175 84.0
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.2e-44 183.7 150 69.3
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 2.5e-42 176.0 152 67.8
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 4.3e-39 165.2 114 75.4
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 1.7e-38 163.3 153 66.0
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 7.7e-36 154.5 159 59.1
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 8.5e-35 151.0 159 58.5
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 1.5e-31 140.2 152 53.3
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 2.6e-31 139.4 154 53.2
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 5.7e-31 138.3 149 54.4
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 5.7e-31 138.3 80 85.0
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 9.7e-31 137.5 149 53.7
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 1.7e-30 136.7 151 52.3
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 2.8e-30 136.0 152 52.0
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 2.8e-30 136.0 152 50.7
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 3.7e-30 135.6 150 53.3
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 1.1e-29 134.0 152 53.3
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.8e-29 133.3 155 52.9
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 2.4e-29 132.9 164 48.8
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 7.0e-29 131.3 150 51.3
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 9.1e-29 131.0 157 51.0
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 1.2e-28 130.6 155 51.0
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 2.0e-28 129.8 152 51.3
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 2.6e-28 129.4 152 50.0
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 3.5e-28 129.0 153 48.4
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 4.5e-28 128.6 152 57.2
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 5.9e-28 128.3 152 52.6
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.0e-27 127.5 152 51.3
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 2.2e-27 126.3 162 48.1
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 2.2e-27 126.3 151 50.3
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 2.9e-27 125.9 173 45.7
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 3.8e-27 125.6 151 50.3
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 5.0e-27 125.2 150 43.3
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 5.0e-27 125.2 151 48.3
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 1.5e-26 123.6 149 47.0
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.9e-26 123.2 142 52.8
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 1.9e-26 123.2 151 50.3
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 4.2e-26 122.1 158 46.2
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 7.2e-26 121.3 150 44.7
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 7.2e-26 121.3 155 45.8
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.2e-25 120.6 151 47.0
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 1.2e-25 120.6 156 45.5
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.2e-25 120.6 158 46.2
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 2.1e-25 119.8 158 44.9
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 3.6e-25 119.0 154 46.8
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 3.6e-25 119.0 155 47.7
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 4.7e-25 118.6 151 45.7
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 1.0e-24 117.5 185 43.8
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.0e-24 117.5 150 44.0
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 2.3e-24 116.3 160 45.6
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 6.7e-24 114.8 154 46.1
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 1.1e-23 114.0 162 46.9
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.5e-23 113.6 151 45.0
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 1.5e-23 113.6 155 49.0
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 1.5e-23 113.6 158 44.3
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.6e-23 112.8 149 49.0
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 9.7e-23 110.9 151 43.0
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 1.7e-22 110.2 156 43.6
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 3.7e-22 109.0 150 47.3
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 3.7e-22 109.0 141 44.0
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 3.7e-22 109.0 153 43.1
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 4.8e-22 108.6 150 46.7
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 3.1e-21 105.9 149 41.6
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 7.0e-21 104.8 151 44.4
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 9.1e-21 104.4 73 67.1
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 9.1e-21 104.4 149 42.3
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 9.1e-21 104.4 157 45.2
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.2e-20 104.0 157 45.2
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 1.2e-20 104.0 156 45.5
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.6e-20 102.8 172 42.4
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 2.6e-20 102.8 151 43.0
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.5e-20 102.4 74 62.2
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 3.5e-20 102.4 155 41.9
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 3.5e-20 102.4 76 64.5
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 5.9e-20 101.7 76 64.5
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 7.7e-20 101.3 73 64.4
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 1.7e-19 100.1 152 42.8
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 1.7e-19 100.1 156 42.3
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 1.7e-19 100.1 152 42.8
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 2.9e-19 99.4 150 40.0
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 3.8e-19 99.0 149 40.3
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 3.8e-19 99.0 103 51.5
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 1.1e-18 97.4 73 64.4
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 1.1e-18 97.4 152 42.8
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 1.5e-18 97.1 160 40.6
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 2.5e-18 96.3 172 41.3
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 5.5e-18 95.1 153 39.9
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 5.5e-18 95.1 164 37.8
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 1.6e-17 93.6 147 40.8
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.6e-17 93.6 78 59.0
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 3.6e-17 92.4 155 39.4
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 1.4e-16 90.5 156 40.4
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 2.3e-16 89.7 71 63.4
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.8e-16 87.8 81 56.8
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.8e-16 87.8 81 56.8
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.6e-12 77.0 153 37.3
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 4.5e-12 75.5 78 50.0
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 8.8e-08 61.2 70 47.1
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 8.8e-08 61.2 70 47.1
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.5e-07 60.5 63 46.0
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 2.0e-07 60.1 152 36.2
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 7.5e-07 58.2 70 45.7
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 7.5e-07 58.2 70 45.7
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.7e-06 57.0 63 44.4
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 1.7e-06 57.0 98 32.7
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 8.3e-06 54.7 35 71.4


User provided reference genes

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