Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 3.2e-104 381.7 190 100.0
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.4e-85 318.5 184 88.0
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 6.8e-70 267.7 184 75.5
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.4e-62 243.4 183 69.4
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 7.6e-61 237.7 178 69.7
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.6e-58 229.9 184 66.3
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 7.6e-53 211.1 175 62.9
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 2.4e-51 206.1 174 64.9
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 6.2e-47 191.4 161 62.1
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 3.4e-45 185.7 193 56.5
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 6.9e-38 161.4 166 55.4
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.7e-36 156.8 162 53.7
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 2.9e-36 156.0 181 48.1
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 1.4e-35 153.7 162 53.1
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.9e-35 153.3 170 50.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 3.2e-35 152.5 167 52.1
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.7e-34 149.4 180 48.9
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 7.9e-34 147.9 172 53.5
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.7e-33 144.8 166 48.2
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.5e-32 143.7 139 54.0
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.5e-32 143.7 156 50.6
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 9.6e-32 141.0 156 49.4
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.3e-31 140.6 157 49.7
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 2.8e-31 139.4 164 49.4
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 4.8e-31 138.7 157 50.3
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 8.2e-31 137.9 164 50.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 8.2e-31 137.9 166 48.2
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.4e-30 137.1 165 47.3
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.2e-29 134.0 172 47.7
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 4.5e-29 132.1 178 44.4
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 4.5e-29 132.1 172 44.2
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 1.0e-28 131.0 182 42.9
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.5e-28 128.3 181 43.6
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.5e-28 128.3 181 43.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 1.4e-27 127.1 157 47.8
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.4e-27 127.1 185 42.7
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.9e-27 126.7 169 42.0
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 7.2e-27 124.8 152 46.1
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 9.3e-27 124.4 167 45.5
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.2e-26 124.0 195 41.0
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 6.1e-26 121.7 163 42.9
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 3.9e-25 119.0 175 39.4
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.1e-24 117.5 162 46.3
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.5e-24 117.1 178 42.1
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 9.7e-24 114.4 114 57.9
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 1.6e-23 113.6 154 46.1
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 6.3e-23 111.7 112 50.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 1.8e-22 110.2 158 42.4
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.4e-22 109.8 198 37.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 6.9e-22 108.2 189 37.6
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.6e-21 106.3 158 39.9
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 6.5e-20 101.7 165 37.0
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.4e-17 94.0 107 48.6
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 3.9e-17 92.4 163 37.4
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 6.9e-14 81.6 71 50.7
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 1.5e-13 80.5 55 69.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 5.9e-13 78.6 73 47.9
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.7e-12 77.0 73 46.6
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 8.5e-12 74.7 115 42.6
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 2.5e-11 73.2 121 40.5
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 4.7e-10 68.9 165 30.9
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.3e-09 66.6 99 38.4
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 1.7e-07 60.5 126 35.7


User provided reference genes

Program Settings