Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G005502 Glycine max HOM05D005182 ORTHO05D006631 3.8e-51 204.5 103 100.0
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 2.1e-28 129.0 74 91.9
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 6.6e-27 124.0 89 76.4
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 1.6e-25 119.4 87 72.4
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 3.6e-25 118.2 86 75.6
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 4.0e-16 88.2 88 64.8
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 6.9e-16 87.4 88 65.9
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 2.9e-14 82.0 88 63.6
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 1.5e-10 69.7 88 59.1
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 1.8e-08 62.8 67 56.7
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 1.8e-08 62.8 74 52.7
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 5.3e-08 61.2 89 49.4
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 5.3e-08 61.2 65 56.9
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 6.9e-08 60.8 86 48.8
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 9.0e-08 60.5 49 63.3
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 2.6e-07 58.9 63 54.0
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 3.4e-07 58.5 89 47.2
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 9.9e-07 57.0 73 50.7
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 9.9e-07 57.0 50 56.0
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 1.7e-06 56.2 45 64.4
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 2.2e-06 55.8 65 53.8
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 2.2e-06 55.8 63 52.4
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 2.2e-06 55.8 63 52.4
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 3.8e-06 55.1 66 48.5
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 3.8e-06 55.1 48 60.4
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 3.8e-06 55.1 73 49.3
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 4.9e-06 54.7 87 40.2
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 4.9e-06 54.7 74 50.0
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 8.4e-06 53.9 40 67.5


User provided reference genes

Program Settings