Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 4.6e-74 281.2 147 100.0
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 3.3e-48 195.3 105 96.2
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 5.3e-38 161.4 107 80.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 1.7e-36 156.4 99 78.8
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.9e-36 155.6 105 77.1
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 8.5e-36 154.1 106 75.5
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 1.5e-35 153.3 106 75.5
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 2.7e-34 149.1 105 73.3
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 6.1e-34 147.9 106 73.6
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 1.4e-33 146.7 106 68.9
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 6.7e-33 144.4 106 74.5
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.5e-32 143.3 106 73.6
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 7.5e-32 141.0 106 73.6
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.3e-31 140.2 105 68.6
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 8.2e-31 137.5 106 65.1
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 1.8e-30 136.3 105 64.8
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 1.8e-30 136.3 105 64.8
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 3.1e-30 135.6 105 67.6
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 4.1e-30 135.2 105 66.7
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 4.1e-30 135.2 108 67.6
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 4.1e-30 135.2 108 67.6
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.2e-29 133.7 106 66.0
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.6e-29 133.3 106 65.1
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.6e-29 133.3 106 64.2
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 5.9e-29 131.3 106 65.1
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.0e-28 130.6 107 63.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.9e-28 129.0 103 67.0
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 3.8e-28 128.6 109 64.2
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 8.5e-28 127.5 108 62.0
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.1e-27 127.1 107 67.3
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 1.1e-27 127.1 107 64.5
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.9e-27 126.3 108 63.9
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.5e-27 125.9 112 64.3
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 5.5e-27 124.8 107 64.5
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 5.5e-27 124.8 107 64.5
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 7.2e-27 124.4 99 64.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 7.2e-27 124.4 107 68.2
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 9.4e-27 124.0 129 55.0
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 9.4e-27 124.0 99 66.7
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.2e-26 123.6 136 53.7
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 2.7e-26 122.5 105 58.1
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.7e-26 122.5 105 58.1
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.7e-26 122.5 105 58.1
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 2.7e-26 122.5 109 60.6
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 8.0e-26 120.9 118 55.9
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 1.0e-25 120.6 102 64.7
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 1.0e-25 120.6 109 56.9
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 1.4e-25 120.2 113 61.1
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.4e-25 120.2 76 75.0
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 1.4e-25 120.2 104 61.5
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.8e-25 119.8 77 76.6
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.8e-25 119.8 77 76.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 3.0e-25 119.0 110 60.9
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 3.0e-25 119.0 110 60.9
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 5.2e-25 118.2 103 60.2
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.2e-25 118.2 102 57.8
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 8.8e-25 117.5 106 57.5
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 8.8e-25 117.5 112 60.7
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.5e-24 116.7 111 57.7
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 1.5e-24 116.7 104 62.5
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.0e-24 116.3 110 58.2
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.6e-24 115.9 112 60.7
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.6e-24 115.9 108 56.5
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.6e-24 115.9 102 63.7
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 5.7e-24 114.8 91 67.0
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 7.5e-24 114.4 105 57.1
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 9.8e-24 114.0 105 57.1
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 1.7e-23 113.2 105 58.1
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 2.2e-23 112.8 106 61.3
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 2.2e-23 112.8 112 58.0
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.8e-23 112.5 108 59.3
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 4.8e-23 111.7 106 52.8
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 4.8e-23 111.7 88 63.6
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 4.8e-23 111.7 78 70.5
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.8e-22 109.8 105 60.0
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 3.1e-22 109.0 94 59.6
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 3.1e-22 109.0 105 60.0
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 4.1e-22 108.6 112 52.7
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 5.4e-22 108.2 78 66.7
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 5.4e-22 108.2 78 66.7
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 7.0e-22 107.8 104 51.9
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 9.1e-22 107.5 104 51.0
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 9.1e-22 107.5 107 55.1
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.6e-21 106.7 104 51.9
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.6e-21 106.7 106 56.6
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 2.0e-21 106.3 104 51.9
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 2.7e-21 105.9 99 56.6
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.5e-21 105.5 76 67.1
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 4.5e-21 105.1 105 52.4
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 7.7e-21 104.4 106 53.8
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 7.7e-21 104.4 104 51.0
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 7.7e-21 104.4 104 51.0
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 7.7e-21 104.4 104 51.0
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 7.7e-21 104.4 106 57.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.7e-20 103.2 104 51.0
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.7e-20 103.2 104 51.0
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 6.6e-20 101.3 99 57.6
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 6.6e-20 101.3 86 64.0
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 8.6e-20 100.9 105 56.2
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.1e-19 100.5 101 52.5
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 5.5e-19 98.2 112 52.7
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 5.5e-19 98.2 79 67.1
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 4.7e-18 95.1 111 54.1
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.0e-17 94.0 105 50.5
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.2e-15 86.3 78 60.3
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 6.3e-15 84.7 109 47.7
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 9.2e-14 80.9 70 57.1
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 1.2e-10 70.5 112 42.9
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.3e-07 57.8 118 37.3
CBR_g50944 Chara braunii HOM05D007045 ORTHO05D008872 4.1e-06 55.5 112 36.6
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 9.2e-06 54.3 64 50.0


User provided reference genes

Program Settings