Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 3.6e-202 708.0 342 100.0
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 3.0e-140 502.3 295 80.7
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.9e-140 501.9 293 80.2
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 6.2e-138 494.6 290 79.3
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 8.1e-138 494.2 312 74.0
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 1.5e-136 490.0 282 80.1
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 1.7e-135 486.5 291 77.7
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 7.3e-131 471.1 281 77.2
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 5.2e-129 464.9 317 69.7
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 5.2e-129 464.9 317 69.7
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.5e-128 463.4 285 74.7
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 6.4e-127 458.0 328 65.2
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 6.4e-127 458.0 307 68.4
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.1e-126 457.2 287 72.5
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 5.4e-126 454.9 325 67.7
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 7.1e-126 454.5 292 70.9
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 7.1e-126 454.5 287 72.1
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 9.3e-126 454.1 287 71.4
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.1e-125 453.0 287 72.1
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 2.7e-125 452.6 316 67.7
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 2.7e-125 452.6 307 67.8
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 3.5e-125 452.2 287 72.1
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.0e-124 450.7 287 70.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.0e-124 449.1 287 70.4
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 3.0e-124 449.1 284 72.2
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 1.1e-123 447.2 284 72.9
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.5e-123 446.8 286 72.0
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.9e-123 446.4 300 69.3
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 1.9e-123 446.4 289 71.6
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.5e-123 446.0 284 72.5
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.3e-123 445.7 284 70.8
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 4.3e-123 445.3 287 72.5
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 5.6e-123 444.9 291 69.8
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 5.6e-123 444.9 288 70.1
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 5.6e-123 444.9 287 71.4
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.6e-122 443.4 287 69.7
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 2.1e-122 443.0 284 72.2
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 4.8e-122 441.8 284 69.7
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 6.2e-122 441.4 287 68.6
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 6.2e-122 441.4 248 83.9
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 8.1e-122 441.0 307 65.8
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 8.1e-122 441.0 287 74.6
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 1.1e-121 440.7 285 69.5
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 1.1e-121 440.7 300 66.7
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.8e-121 439.9 281 71.5
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.4e-121 439.5 288 68.8
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 3.1e-121 439.1 285 69.1
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 3.1e-121 439.1 287 70.7
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 4.0e-121 438.7 286 69.6
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 5.3e-121 438.3 323 63.8
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 6.9e-121 438.0 317 64.4
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.2e-120 437.2 286 68.9
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 1.2e-120 437.2 286 68.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 2.0e-120 436.4 287 67.9
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.0e-120 436.4 285 70.5
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 3.4e-120 435.6 286 68.2
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 3.4e-120 435.6 286 68.5
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 4.5e-120 435.3 286 69.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 4.5e-120 435.3 287 67.9
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 5.8e-120 434.9 287 68.6
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 5.8e-120 434.9 286 67.8
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 5.8e-120 434.9 284 69.4
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 7.6e-120 434.5 293 66.6
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 9.9e-120 434.1 287 69.3
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.3e-119 433.7 290 69.0
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.3e-119 433.7 285 68.8
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 1.7e-119 433.3 286 68.2
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 2.2e-119 433.0 287 67.9
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 2.9e-119 432.6 287 69.0
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.9e-119 432.6 297 66.7
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 2.9e-119 432.6 285 68.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 6.4e-119 431.4 304 65.8
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.1e-118 430.6 287 67.9
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.4e-118 430.3 287 67.9
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 3.2e-118 429.1 285 68.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 9.3e-118 427.6 287 70.0
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 6.0e-117 424.9 285 67.4
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 3.0e-116 422.5 297 64.0
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 3.7e-114 415.6 268 70.1
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.5e-112 410.2 286 61.9
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 4.9e-111 405.2 314 61.8
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 8.4e-111 404.4 310 61.9
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.1e-108 395.2 283 64.3
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.6e-106 390.2 286 64.3
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 4.0e-105 385.6 285 59.3
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 6.9e-105 384.8 244 71.3
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.5e-104 383.6 295 60.0
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 3.4e-104 382.5 249 69.5
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 3.8e-103 379.0 238 73.1
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 1.2e-101 374.0 247 66.4
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 1.6e-101 373.6 283 60.4
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.7e-95 353.6 303 58.1
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 8.5e-95 351.3 286 54.5
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.4e-92 344.0 291 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 7.7e-88 328.2 281 52.3
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 4.2e-86 322.4 212 71.2
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.4e-73 280.8 195 63.6
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.2e-69 267.7 293 45.4
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 5.7e-59 232.3 143 72.0
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 5.5e-54 215.7 115 84.3
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 2.0e-51 207.2 143 65.7
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.2e-45 188.0 108 73.1
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 2.0e-40 170.6 285 36.1
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.3e-39 167.2 105 72.4
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 2.8e-37 160.2 99 73.7
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.6e-35 153.7 114 62.3
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 1.2e-29 134.8 85 74.1
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 7.5e-27 125.6 155 43.2
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.6e-24 117.9 112 51.8
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 5.2e-20 102.8 127 41.7
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.5e-14 84.7 55 65.5
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.1e-13 80.9 52 67.3
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 1.2e-08 65.1 44 61.4
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.5e-06 58.2 42 61.9
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 4.3e-06 56.6 41 56.1


User provided reference genes

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