Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 9.2e-147 523.5 252 100.0
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 6.2e-135 484.2 252 91.3
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 4.0e-134 481.5 252 90.9
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 1.5e-133 479.6 252 90.1
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.9e-131 472.6 252 88.5
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 6.0e-130 467.6 252 87.7
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.0e-129 466.8 252 87.3
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 2.5e-128 462.2 252 86.9
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 9.5e-128 460.3 252 86.5
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 5.2e-126 454.5 262 85.1
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 8.3e-124 447.2 252 84.5
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.4e-123 446.4 252 84.5
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 2.9e-116 422.2 251 77.7
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 4.9e-116 421.4 252 76.6
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 4.2e-115 418.3 252 76.6
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.6e-114 414.8 252 75.0
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 3.0e-113 412.1 252 75.8
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.1e-113 411.4 252 75.8
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.7e-113 410.6 252 75.8
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 8.7e-113 410.6 252 75.8
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.9e-112 409.5 252 75.0
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.2e-111 406.8 250 74.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 1.6e-111 406.4 252 75.0
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.0e-109 399.4 252 73.4
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 2.6e-109 399.1 252 72.6
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.6e-109 399.1 252 72.6
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.6e-109 399.1 252 74.2
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 9.9e-109 397.1 252 72.6
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.3e-108 396.7 252 72.2
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.7e-108 396.4 252 73.4
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 2.4e-107 392.5 252 71.4
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 3.2e-107 392.1 252 73.0
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.2e-107 392.1 252 69.8
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 3.2e-107 392.1 252 73.0
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.3e-105 386.7 252 71.4
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.7e-105 386.3 252 72.2
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 8.7e-105 384.0 252 70.2
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.5e-104 382.5 252 69.4
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.3e-104 382.1 252 71.0
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.3e-104 382.1 253 70.4
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 4.3e-104 381.7 252 68.7
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 2.1e-103 379.4 256 70.7
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.1e-103 379.4 253 69.6
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.8e-103 379.0 252 68.3
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 4.8e-103 378.3 253 68.8
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.8e-102 376.3 253 68.4
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.1e-102 375.6 252 69.8
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 4.0e-102 375.2 252 67.5
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 5.3e-102 374.8 252 72.6
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.3e-102 374.8 252 69.8
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 6.9e-102 374.4 252 70.6
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 1.2e-101 373.6 253 68.4
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.2e-101 373.6 252 69.4
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 1.2e-101 373.6 252 69.0
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.5e-101 373.2 252 70.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 2.6e-101 372.5 253 69.6
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 2.6e-101 372.5 252 69.8
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 3.4e-101 372.1 253 67.6
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 4.5e-101 371.7 252 68.7
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 7.6e-101 370.9 253 67.6
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 9.9e-101 370.5 252 68.3
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.7e-100 369.8 251 67.3
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.7e-100 369.8 253 67.2
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 4.9e-100 368.2 252 67.1
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 67.1
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.2e-98 363.6 252 66.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 2.1e-98 362.8 254 68.1
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 3.5e-98 362.1 253 68.0
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 7.9e-98 360.9 252 65.5
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 1.0e-97 360.5 252 66.3
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 5.1e-97 358.2 252 67.9
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 1.1e-96 357.1 254 66.9
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 2.5e-96 355.9 252 65.1
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 6.2e-95 351.3 250 65.2
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.4e-94 349.4 253 64.4
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.0e-94 348.6 255 66.7
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 5.3e-94 348.2 247 64.4
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 9.0e-94 347.4 254 64.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.5e-93 346.7 254 63.4
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.5e-93 346.7 254 63.4
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.5e-93 346.7 254 63.4
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.5e-93 346.7 254 63.4
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 2.6e-93 345.9 254 63.0
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 5.8e-93 344.7 254 63.0
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 9.9e-93 344.0 252 63.5
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 9.9e-93 344.0 254 63.0
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.7e-92 343.2 254 65.0
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 1.7e-92 343.2 254 65.0
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.7e-92 343.2 247 64.4
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 2.2e-92 342.8 252 63.9
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 6.4e-92 341.3 254 63.4
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.9e-91 339.7 253 62.8
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.8e-89 333.2 252 61.5
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 3.0e-89 332.4 230 69.1
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 6.5e-84 314.7 252 57.1
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 3.5e-82 308.9 205 69.3
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 7.9e-82 307.8 248 56.9
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 3.0e-81 305.8 241 59.8
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 6.3e-79 298.1 239 55.2
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 7.2e-75 284.6 251 54.2
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.5e-72 276.9 249 53.4
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 7.4e-72 274.6 249 53.0
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 2.8e-71 272.7 250 52.0
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 4.8e-71 271.9 250 51.6
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.3e-63 247.3 252 46.4
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.0e-61 240.0 154 67.5
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.9e-59 233.4 267 44.2
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 2.4e-54 216.5 251 40.6
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 7.0e-54 214.9 141 73.0
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 6.8e-49 198.4 261 45.6
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 8.3e-47 191.4 287 40.1
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 4.5e-45 185.7 111 72.1
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 2.5e-43 179.9 100 85.0
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 6.3e-39 165.2 95 82.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 3.6e-26 122.9 75 65.3
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.5e-19 100.1 55 78.2
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.6e-18 97.4 92 56.5
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 3.4e-16 89.7 154 40.3
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.3e-15 87.8 52 67.3
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.9e-12 76.3 45 75.6
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 4.4e-08 62.8 102 32.4
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.8e-08 62.4 137 32.1
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 2.2e-07 60.5 111 34.2
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 4.9e-07 59.3 111 34.2
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.3e-07 58.5 111 32.4
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.2e-06 56.6 111 31.5
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 7.1e-06 55.5 111 33.3


User provided reference genes

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