Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 5.7e-167 590.9 308 100.0
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.2e-156 556.6 308 93.8
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 2.3e-131 472.6 312 79.8
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.8e-128 463.0 312 81.7
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.9e-125 453.0 310 81.3
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.2e-121 440.3 312 75.6
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 2.1e-116 422.9 313 74.8
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 3.5e-116 422.2 257 85.2
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 7.8e-116 421.0 314 73.6
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 5.6e-114 414.8 327 70.9
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 2.0e-111 406.4 317 73.5
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 4.4e-111 405.2 263 79.5
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.3e-110 403.7 312 70.2
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 2.2e-110 402.9 308 71.1
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 8.4e-110 401.0 311 71.1
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.9e-109 399.8 310 69.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 3.2e-109 399.1 304 71.1
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 7.8e-108 394.4 307 69.1
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 1.0e-107 394.0 313 69.6
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.7e-107 393.3 269 76.6
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 1.7e-107 393.3 313 69.3
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 5.1e-107 391.7 260 77.3
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.3e-105 387.1 265 74.7
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 4.0e-104 382.1 309 68.6
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 1.5e-103 380.2 309 67.6
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.5e-103 380.2 310 66.8
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.6e-103 379.4 274 72.3
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 3.4e-103 379.0 294 69.7
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 7.6e-103 377.9 300 68.3
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 2.9e-102 375.9 235 80.9
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 3.8e-102 375.6 278 71.2
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 2.4e-101 372.9 281 67.3
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 2.4e-101 372.9 318 65.7
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 4.2e-101 372.1 258 74.0
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 9.3e-101 370.9 259 71.4
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 2.1e-100 369.8 277 72.6
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.1e-100 369.8 264 72.0
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 3.5e-100 369.0 274 68.2
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 4.6e-100 368.6 305 66.6
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 6.0e-100 368.2 310 65.2
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 1.3e-99 367.1 269 68.8
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 3.0e-99 365.9 305 64.9
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.5e-98 363.6 265 69.1
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.9e-98 363.2 279 67.0
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.9e-98 363.2 269 68.0
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.9e-98 363.2 259 74.1
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 5.6e-98 361.7 265 69.8
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 7.4e-98 361.3 279 66.7
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 7.4e-98 361.3 255 71.0
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 9.6e-98 360.9 309 64.1
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.6e-97 360.1 259 70.3
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.6e-97 360.1 311 63.3
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 1.6e-97 360.1 227 79.3
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 1.6e-97 360.1 312 63.8
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 6.2e-97 358.2 271 73.1
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 8.1e-97 357.8 231 75.8
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 8.1e-97 357.8 265 68.3
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.1e-96 357.5 312 62.5
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 1.1e-96 357.5 265 69.4
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 1.4e-96 357.1 300 63.7
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 5.3e-96 355.1 265 69.4
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 2.6e-95 352.8 280 64.3
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 3.4e-95 352.4 315 61.6
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 3.4e-95 352.4 254 70.5
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 5.8e-95 351.7 232 76.3
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 5.8e-95 351.7 266 68.0
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 5.8e-95 351.7 275 68.7
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 1.3e-94 350.5 295 63.4
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 3.8e-94 349.0 290 63.8
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 8.4e-94 347.8 292 64.0
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 7.1e-93 344.7 225 78.7
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 7.1e-93 344.7 297 63.0
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.3e-91 340.5 296 62.5
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 1.8e-91 340.1 307 61.9
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.8e-91 340.1 261 67.4
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 2.3e-91 339.7 259 68.3
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 2.3e-91 339.7 254 68.9
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 3.9e-91 339.0 262 66.0
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 5.1e-91 338.6 271 65.3
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.5e-90 337.0 271 64.9
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.5e-90 337.0 271 64.9
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 5.6e-90 335.1 271 64.6
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 5.6e-90 335.1 263 66.5
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 5.6e-90 335.1 228 75.0
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 9.6e-90 334.3 279 63.4
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 6.9e-88 328.2 273 61.2
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 9.0e-88 327.8 308 59.4
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 1.5e-87 327.0 300 61.7
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 1.0e-86 324.3 281 63.0
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.9e-86 322.0 248 66.1
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.9e-86 322.0 248 66.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 6.5e-86 321.6 261 64.8
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.2e-85 319.3 248 66.1
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 5.5e-85 318.5 233 68.7
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 8.7e-83 311.2 318 58.5
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.3e-81 307.4 224 68.3
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 8.2e-81 304.7 263 62.7
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 9.0e-80 301.2 240 67.1
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 9.4e-77 291.2 288 56.9
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.8e-73 279.6 217 68.2
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 6.3e-73 278.5 226 65.0
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.4e-72 277.3 292 50.3
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 5.0e-70 268.9 237 58.2
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 4.2e-69 265.8 275 54.9
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 2.0e-66 256.9 260 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 2.5e-61 240.0 245 52.7
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.3e-59 233.4 226 53.1
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.1e-53 214.5 177 61.6
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 2.5e-53 213.4 148 73.0
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.8e-51 207.2 259 48.3
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 6.1e-28 129.0 221 38.0
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.6e-23 114.4 122 54.1
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.3e-22 111.3 89 68.5
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 5.2e-19 99.4 226 31.4
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 2.7e-15 87.0 60 68.3
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 2.7e-15 87.0 60 68.3
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 2.3e-11 73.9 227 30.0


User provided reference genes

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