Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G231700 Glycine max HOM05D009825 ORTHO05D012095 1.2e-48 196.4 116 100.0
Glyma.18G231500 Glycine max HOM05D009825 ORTHO05D012095 1.1e-17 93.6 85 65.9
Glyma.18G231400 Glycine max HOM05D009825 ORTHO05D012095 3.5e-16 88.6 84 63.1
Lj1g0008320 Lotus japonicus HOM05D009825 ORTHO05D012095 3.5e-16 88.6 87 59.8
Lj1g0016800 Lotus japonicus HOM05D009825 ORTHO05D012095 2.2e-15 85.9 85 58.8
Medtr7g077340 Medicago truncatula HOM05D009825 ORTHO05D012095 2.9e-15 85.5 79 58.2
Medtr7g077310 Medicago truncatula HOM05D009825 ORTHO05D012095 6.5e-15 84.3 73 64.4
Glyma.09G260301 Glycine max HOM05D009825 ORTHO05D012095 8.5e-15 84.0 88 55.7
Medtr7g077215 Medicago truncatula HOM05D009825 ORTHO05D012095 1.5e-14 83.2 78 57.7
TPR.G23764 Trifolium pratense HOM05D009825 ORTHO05D012095 1.5e-14 83.2 85 60.0
VMungo1383G2160 Vigna mungo HOM05D009825 ORTHO05D012095 4.2e-14 81.6 82 56.1
Medtr7g077210 Medicago truncatula HOM05D009825 ORTHO05D012095 1.2e-13 80.1 113 46.9
Medtr7g077300 Medicago truncatula HOM05D009825 ORTHO05D012095 2.7e-13 79.0 110 62.7
Glyma.09G260400 Glycine max HOM05D009825 ORTHO05D012095 1.5e-11 73.2 83 51.8
Medtr7g077260 Medicago truncatula HOM05D009825 ORTHO05D012095 2.0e-11 72.8 118 57.6
Ca_07908_v3 Cicer arietinum L. HOM05D009825 ORTHO05D012095 3.4e-11 72.0 87 50.6
Glyma.18G231600 Glycine max HOM05D009825 ORTHO05D012095 5.7e-11 71.2 78 53.8
Medtr7g077220 Medicago truncatula HOM05D009825 ORTHO05D012095 8.3e-10 67.4 60 56.7
Medtr7g077160 Medicago truncatula HOM05D009825 ORTHO05D012095 1.4e-09 66.6 65 53.8
Lalb_Chr02g0149691 Lupinus albus HOM05D009825 ORTHO05D012095 1.2e-08 63.5 90 46.7
Medtr7g077180 Medicago truncatula HOM05D009825 ORTHO05D012095 5.9e-08 61.2 80 45.0
Glyma.14G117700 Glycine max HOM05D013043 ORTHO05D015142 1.3e-07 60.1 109 48.6
Glyma.09G158500 Glycine max HOM05D013043 ORTHO05D015142 3.8e-07 58.5 109 48.6
Glyma.09G158900 Glycine max HOM05D013043 ORTHO05D015142 3.8e-07 58.5 109 48.6
arahy.Tifrunner.gnm1.ann1.A9Z54Y Arachis hypogaea HOM05D022706 ORTHO05D023754 5.0e-07 58.2 76 48.7
Glyma.16G208900 Glycine max HOM05D013043 ORTHO05D015142 5.0e-07 58.2 115 46.1
VMungo1383G3062 Vigna mungo HOM05D061547 ORTHO05D043375 5.0e-07 58.2 90 38.9
Glyma.09G158700 Glycine max HOM05D013043 ORTHO05D015142 8.6e-07 57.4 59 69.5
Glyma.09G158800 Glycine max HOM05D013043 ORTHO05D015142 8.6e-07 57.4 59 69.5
Glyma.14G117600 Glycine max HOM05D013043 ORTHO05D015142 8.6e-07 57.4 59 69.5
Glyma.09G260500 Glycine max HOM05D009825 ORTHO05D012095 1.5e-06 56.6 73 46.6
arahy.Tifrunner.gnm1.ann1.CGU5TI Arachis hypogaea HOM05D022706 ORTHO05D023754 2.5e-06 55.8 75 46.7
Glyma.09G158600 Glycine max HOM05D013043 ORTHO05D015142 2.5e-06 55.8 108 45.4
arahy.Tifrunner.gnm1.ann1.6M4P9K Arachis hypogaea HOM05D022706 ORTHO05D023754 9.5e-06 53.9 68 45.6
arahy.Tifrunner.gnm1.ann1.L7JIJ5 Arachis hypogaea HOM05D022706 ORTHO05D023754 9.5e-06 53.9 68 45.6


User provided reference genes

Program Settings