Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G222851 Glycine max HOM05D000200 ORTHO05D211765 8.3e-73 276.9 140 100.0
Glyma.09G284800 Glycine max HOM05D000200 ORTHO05D001546 1.5e-37 159.8 96 84.4
Glyma.20G001300 Glycine max HOM05D000200 ORTHO05D001546 2.0e-34 149.4 96 78.1
VMungo0251G0678 Vigna mungo HOM05D000200 ORTHO05D001546 2.5e-29 132.5 96 70.8
Phvul.003G002200 Phaseolus vulgaris HOM05D000200 ORTHO05D001546 5.8e-26 121.3 94 64.9
Lj2g0009687 Lotus japonicus HOM05D000200 ORTHO05D001546 4.2e-24 115.2 96 65.6
TPR.G29788 Trifolium pratense HOM05D000200 ORTHO05D001546 1.9e-21 106.3 96 58.3
TPR.G36822 Trifolium pratense HOM05D000200 ORTHO05D012270 7.4e-21 104.4 94 57.4
Ca_12382_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 1.1e-19 100.5 97 57.7
Lalb_Chr10g0094881 Lupinus albus HOM05D000200 ORTHO05D001546 1.1e-19 100.5 97 58.8
Medtr1g038793 Medicago truncatula HOM05D000200 ORTHO05D001546 3.1e-19 99.0 96 57.3
Psat6g100120 Pisum sativum HOM05D000200 ORTHO05D001546 4.9e-17 91.7 96 55.2
Psat6g233760 Pisum sativum HOM05D000200 ORTHO05D001546 2.1e-15 86.3 96 49.0
arahy.Tifrunner.gnm1.ann1.L4L3GZ Arachis hypogaea HOM05D000200 ORTHO05D001546 1.0e-14 84.0 94 50.0
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 3.0e-14 82.4 96 46.9
Phvul.007G014600 Phaseolus vulgaris HOM05D000200 ORTHO05D001546 6.7e-14 81.3 96 46.9
Medtr1g114540 Medicago truncatula HOM05D000200 ORTHO05D001546 1.5e-13 80.1 96 46.9
Glyma.20G102900 Glycine max HOM05D000200 ORTHO05D001546 2.5e-13 79.3 96 45.8
VMungo0720G1272 Vigna mungo HOM05D000200 ORTHO05D001546 1.6e-12 76.6 96 44.8
TPR.G4106 Trifolium pratense HOM05D000200 ORTHO05D001546 3.7e-12 75.5 96 44.8
Lj5g0006945 Lotus japonicus HOM05D000200 ORTHO05D001546 4.1e-11 72.0 93 43.0
Lalb_Chr02g0143641 Lupinus albus HOM05D000200 ORTHO05D001546 2.0e-10 69.7 93 47.3
Gohir.A03G166200 Gossypium hirsutum HOM05D000200 ORTHO05D001546 5.0e-09 65.1 93 38.7
Potri.007G074800 Populus trichocarpa HOM05D000200 ORTHO05D001546 1.1e-08 63.9 97 40.2
Prupe.1G349100 Prunus persica HOM05D000200 ORTHO05D001546 1.1e-08 63.9 96 43.8
TWI53G0999 Tripterygium wilfordii HOM05D000200 ORTHO05D001546 4.2e-08 62.0 96 36.5
MD16G1004100 Malus domestica HOM05D000200 ORTHO05D001546 5.5e-08 61.6 97 43.3
CANSAT78G0397 Cannabis sativa HOM05D000200 ORTHO05D001546 9.3e-08 60.8 97 40.2
Potri.005G089200 Populus trichocarpa HOM05D000200 ORTHO05D001546 1.2e-07 60.5 96 38.5
QL03p045482 Quercus lobata HOM05D000200 ORTHO05D001546 2.1e-07 59.7 90 43.3
Duzib052G0298 Durio zibethinus HOM05D000200 ORTHO05D001546 2.7e-07 59.3 93 38.7
TAR629G2757 Trochodendron aralioides HOM05D000200 ORTHO05D001546 2.7e-07 59.3 84 40.5
Sabra05G0073400 Salix brachista HOM05D000200 ORTHO05D001546 3.6e-07 58.9 96 38.5
Ciclev10030552m.g Citrus clementina HOM05D000200 ORTHO05D001546 4.6e-07 58.5 96 37.5
Gohir.D02G189400 Gossypium hirsutum HOM05D000200 ORTHO05D001546 7.9e-07 57.8 70 44.3
FAN07G1663 Fragaria x ananassa HOM05D000200 ORTHO05D001546 1.3e-06 57.0 93 37.6
Gorai.005G212100 Gossypium raimondii HOM05D000200 ORTHO05D001546 2.3e-06 56.2 70 42.9
RcHm_v2.0_Chr4g0446931 Rosa chinensis HOM05D000200 ORTHO05D001546 3.9e-06 55.5 94 38.3
FvH4_4g37130 Fragaria vesca HOM05D000200 ORTHO05D001546 6.7e-06 54.7 98 37.8
FAN12G3959 Fragaria x ananassa HOM05D000200 ORTHO05D001546 6.7e-06 54.7 98 37.8


User provided reference genes

Program Settings