Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G193100 Glycine max HOM05D008285 ORTHO05D010431 4.5e-25 117.1 57 100.0
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.3e-08 62.4 57 57.9
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.3e-08 62.4 57 57.9
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 1.7e-08 62.0 45 68.9
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 2.9e-08 61.2 57 57.9
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 3.8e-08 60.8 52 57.7
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 6.5e-08 60.1 51 58.8
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 8.5e-08 59.7 51 58.8
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 8.5e-08 59.7 51 58.8
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 8.5e-08 59.7 51 58.8
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 8.5e-08 59.7 58 58.6
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 1.1e-07 59.3 50 58.0
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 1.4e-07 58.9 50 58.0
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 1.9e-07 58.5 50 58.0
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 1.9e-07 58.5 50 58.0
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 2.5e-07 58.2 46 65.2
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 4.2e-07 57.4 44 61.4
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 4.2e-07 57.4 44 61.4
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 4.2e-07 57.4 50 58.0
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 4.2e-07 57.4 50 56.0
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 4.2e-07 57.4 51 56.9
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 9.4e-07 56.2 57 54.4
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 9.4e-07 56.2 57 52.6
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 9.4e-07 56.2 50 56.0
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.2e-06 55.8 50 56.0
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 2.1e-06 55.1 51 52.9
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 2.7e-06 54.7 50 54.0
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 3.6e-06 54.3 50 52.0
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 6.1e-06 53.5 46 56.5
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 6.1e-06 53.5 55 47.3
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 6.1e-06 53.5 55 47.3
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 7.9e-06 53.1 47 61.7
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 7.9e-06 53.1 44 59.1
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 7.9e-06 53.1 50 50.0
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 7.9e-06 53.1 46 56.5


User provided reference genes

Program Settings