Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 1.6e-106 389.4 194 100.0
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 6.3e-95 350.9 191 91.6
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 1.2e-85 320.1 194 81.4
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 6.5e-84 314.3 194 80.4
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.1e-83 313.5 194 79.9
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 3.9e-81 305.1 183 81.4
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.7e-76 289.7 185 77.8
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 7.2e-75 284.3 166 80.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 1.3e-71 273.5 187 74.9
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 4.8e-71 271.6 187 74.3
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 6.3e-71 271.2 187 73.8
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 1.8e-70 269.6 174 76.4
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 3.1e-70 268.9 187 73.8
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 1.3e-60 236.9 174 66.7
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.4e-57 226.9 177 62.1
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.4e-57 226.9 170 65.9
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 2.3e-57 226.1 137 79.6
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 4.0e-57 225.3 175 64.0
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 5.2e-57 224.9 172 63.4
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 5.2e-57 224.9 172 63.4
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.2e-56 223.8 170 64.7
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.5e-56 223.4 178 64.0
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.5e-56 223.4 170 63.5
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 1.5e-56 223.4 170 61.8
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 4.4e-56 221.9 172 62.8
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 5.7e-56 221.5 170 64.7
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 9.8e-56 220.7 170 64.1
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 9.8e-56 220.7 170 63.5
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.7e-55 219.9 171 62.0
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 2.2e-55 219.5 170 63.5
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.2e-55 219.5 171 62.6
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 2.2e-55 219.5 173 61.3
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.9e-55 218.4 170 63.5
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.3e-55 218.0 171 62.6
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 6.3e-55 218.0 137 78.1
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 8.3e-55 217.6 171 61.4
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 8.3e-55 217.6 170 63.5
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 8.3e-55 217.6 171 61.4
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.1e-54 217.2 170 63.5
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.4e-54 216.9 171 62.0
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.8e-54 216.5 170 62.9
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 4.1e-54 215.3 170 62.9
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 5.4e-54 214.9 170 61.2
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 9.2e-54 214.2 170 62.4
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 9.2e-54 214.2 173 61.3
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 1.2e-53 213.8 171 62.0
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 5.9e-53 211.5 166 62.0
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 7.7e-53 211.1 170 59.4
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 1.0e-52 210.7 183 57.4
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 1.0e-52 210.7 171 59.6
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 1.3e-52 210.3 174 59.2
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 6.6e-52 208.0 175 60.6
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 6.6e-52 208.0 170 60.6
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.5e-51 206.8 176 57.4
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 4.3e-51 205.3 170 61.8
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 4.3e-51 205.3 178 56.2
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 5.6e-51 204.9 166 60.2
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.6e-50 203.4 171 59.1
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 2.1e-50 203.0 176 55.1
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 2.1e-50 203.0 165 62.4
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 2.8e-50 202.6 174 59.2
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 8.0e-50 201.1 177 53.7
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 8.0e-50 201.1 177 53.7
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.0e-49 200.7 177 53.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.8e-49 199.9 172 57.0
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 1.8e-49 199.9 174 56.3
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.8e-49 199.9 132 77.3
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.3e-49 199.5 174 55.2
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 4.0e-49 198.7 142 67.6
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 4.0e-49 198.7 155 61.9
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 8.9e-49 197.6 175 53.7
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.5e-48 196.8 170 58.2
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 2.0e-48 196.4 177 53.7
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 3.4e-48 195.7 174 54.0
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 3.4e-48 195.7 179 52.0
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 2.9e-47 192.6 174 53.4
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 6.4e-47 191.4 171 54.4
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 8.3e-47 191.0 153 64.1
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.1e-46 190.7 150 60.7
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 1.4e-46 190.3 143 64.3
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.8e-46 189.9 174 51.1
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 3.2e-46 189.1 168 53.0
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 7.0e-46 188.0 155 59.4
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 7.0e-46 188.0 175 52.0
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 7.0e-46 188.0 171 53.8
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 2.3e-44 183.0 172 55.2
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 3.0e-44 182.6 172 54.7
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 6.6e-44 181.4 191 52.9
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 3.3e-43 179.1 191 52.4
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 4.3e-43 178.7 169 52.7
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 3.4e-40 169.1 130 61.5
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 3.4e-40 169.1 135 60.7
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 2.9e-39 166.0 133 59.4
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 3.7e-39 165.6 134 58.2
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 3.2e-38 162.5 180 48.3
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 4.1e-38 162.2 190 46.3
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 3.5e-37 159.1 130 56.9
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 7.8e-37 157.9 130 59.2
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 6.6e-36 154.8 180 45.0
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 6.2e-34 148.3 195 42.6
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.4e-33 147.1 178 45.5
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 9.2e-30 134.4 110 56.4
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 7.8e-29 131.3 103 64.1
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 2.6e-24 116.3 151 45.0
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 3.4e-24 115.9 128 43.0
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 3.8e-23 112.5 173 40.5
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 7.3e-19 98.2 170 37.1
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 5.2e-17 92.0 155 38.7
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 6.9e-17 91.7 149 36.2
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 6.9e-17 91.7 173 36.4
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 9.9e-16 87.8 107 38.3
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 5.1e-12 75.5 123 35.0
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 7.3e-11 71.6 135 31.1
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 9.0e-09 64.7 48 60.4
Glyma.08G289700 Glycine max HOM05D002799 ORTHO05D008889 1.5e-08 63.9 36 86.1
Glyma.18G134800 Glycine max HOM05D002799 ORTHO05D008889 3.4e-08 62.8 33 93.9


User provided reference genes

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