Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.2e-181 639.8 337 100.0
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 4.6e-170 601.3 337 94.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 1.9e-168 595.9 337 91.7
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 3.7e-159 565.1 321 91.3
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.2e-157 560.1 339 86.7
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.4e-155 553.1 337 84.9
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 2.5e-155 552.4 337 85.5
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.6e-154 549.7 337 84.6
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 1.8e-153 546.2 337 84.6
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.5e-152 543.1 337 84.0
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 3.1e-150 535.4 321 86.9
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 7.2e-147 524.2 327 84.4
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 3.7e-143 511.9 332 78.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.8e-142 509.6 337 78.6
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 9.1e-142 507.3 337 77.7
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 9.1e-142 507.3 337 77.4
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 2.0e-141 506.1 337 77.4
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 4.5e-141 505.0 329 78.7
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 6.5e-140 501.1 337 76.6
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 3.2e-139 498.8 333 73.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 5.5e-139 498.0 337 75.1
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 7.2e-139 497.7 337 76.0
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.2e-138 496.9 336 75.6
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.6e-138 496.5 329 77.2
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 2.7e-138 495.7 337 76.9
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 4.7e-138 495.0 337 75.7
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.0e-137 492.3 337 74.8
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 4.0e-137 491.9 336 75.9
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 6.7e-137 491.1 338 75.4
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.1e-136 490.3 338 75.4
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 2.6e-136 489.2 334 74.9
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.3e-136 488.8 336 74.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 4.4e-136 488.4 337 73.6
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 5.7e-136 488.0 334 75.1
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 7.4e-136 487.6 337 74.2
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 9.7e-136 487.3 330 73.6
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 9.7e-136 487.3 330 73.6
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.3e-135 486.9 334 74.6
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 2.8e-135 485.7 328 75.9
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.1e-134 483.8 338 74.6
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 1.8e-134 483.0 332 74.1
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 1.8e-134 483.0 336 73.8
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 3.1e-134 482.3 332 74.4
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 5.3e-134 481.5 335 74.0
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 9.1e-134 480.7 337 74.2
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.2e-133 480.3 336 74.4
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 2.0e-133 479.6 316 78.2
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 4.5e-133 478.4 337 74.2
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 2.9e-132 475.7 332 72.9
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 3.8e-132 475.3 337 73.3
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 3.8e-132 475.3 328 74.4
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 6.5e-132 474.6 337 73.3
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 8.5e-132 474.2 336 72.6
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 8.5e-132 474.2 334 74.0
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.5e-131 473.4 337 73.0
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.5e-131 472.6 329 72.9
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 3.2e-131 472.2 337 72.7
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 2.1e-130 469.5 335 71.9
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 4.7e-130 468.4 374 68.2
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 6.1e-130 468.0 326 73.6
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 6.1e-130 468.0 327 74.3
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 2.0e-128 463.0 355 68.7
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 2.0e-128 463.0 337 72.4
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.8e-127 459.1 329 70.8
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 4.8e-127 458.4 337 69.7
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.4e-126 456.8 336 70.5
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.8e-126 456.4 332 70.2
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.4e-126 456.1 346 69.7
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.4e-126 456.1 398 64.3
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 2.7e-125 452.6 335 70.1
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 3.5e-125 452.2 336 69.3
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.9e-125 451.4 332 69.9
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 5.9e-125 451.4 337 69.1
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 7.7e-125 451.1 337 69.4
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.9e-123 446.4 336 68.5
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 4.0e-121 438.7 321 69.8
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 1.7e-119 433.3 332 66.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 4.9e-119 431.8 344 66.0
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.6e-114 416.8 337 66.5
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 2.3e-113 412.9 337 65.9
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.5e-112 410.2 337 64.1
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 5.7e-112 408.3 282 75.9
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 5.4e-110 401.7 332 65.4
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 2.7e-109 399.4 329 65.0
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.9e-108 396.0 300 67.7
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 3.9e-108 395.6 329 63.5
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 1.5e-107 393.7 340 62.4
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 2.9e-103 379.4 326 58.6
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.1e-97 360.9 254 71.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 4.0e-97 359.0 333 54.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 2.7e-93 346.3 321 56.4
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.4e-89 334.0 243 70.0
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.6e-88 329.7 325 53.8
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.9e-86 323.6 205 78.5
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 6.6e-84 315.1 197 77.2
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.3e-83 312.4 325 50.8
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.6e-77 293.9 183 78.1
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 3.9e-76 289.3 201 75.6
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.9e-70 270.4 325 46.2
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 7.1e-70 268.5 238 62.6
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.3e-66 257.7 319 47.6
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.8e-65 253.8 374 45.2
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 6.9e-65 251.9 348 42.0
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 3.9e-60 236.1 175 67.4
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.9e-51 207.2 175 54.9
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 3.0e-44 183.3 153 66.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.3e-41 172.6 278 42.4
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 5.3e-41 172.6 278 42.4
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.0e-39 168.3 334 32.3
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.2e-32 144.8 125 65.6
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 1.7e-31 141.0 86 77.9
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.8e-28 131.0 124 57.3
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 9.1e-25 118.6 338 30.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.2e-21 108.2 74 68.9
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-16 90.5 72 68.1
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 2.7e-16 90.5 72 68.1
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 8.0e-13 79.0 55 74.5


User provided reference genes

Program Settings