Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G112500 Glycine max HOM05D006132 ORTHO05D007305 2.6e-43 178.3 89 100.0
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 3.9e-36 154.5 80 97.5
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 2.2e-34 148.7 80 93.8
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 3.7e-34 147.9 80 90.0
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 4.8e-34 147.5 80 91.2
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 1.1e-33 146.4 80 90.0
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 1.1e-33 146.4 80 90.0
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 1.4e-33 146.0 80 90.0
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 4.1e-33 144.4 80 88.8
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 5.3e-33 144.1 81 87.7
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 5.3e-33 144.1 80 90.0
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 7.0e-33 143.7 80 86.2
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 7.0e-33 143.7 80 86.2
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 7.0e-33 143.7 80 88.8
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 9.1e-33 143.3 80 87.5
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 9.1e-33 143.3 80 87.5
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 1.2e-32 142.9 80 87.5
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 1.2e-32 142.9 80 88.8
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 1.6e-32 142.5 80 88.8
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 2.0e-32 142.1 80 86.2
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 2.6e-32 141.7 80 86.2
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 2.6e-32 141.7 80 86.2
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 2.6e-32 141.7 80 86.2
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 3.5e-32 141.4 80 87.5
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 3.5e-32 141.4 80 85.0
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 4.5e-32 141.0 80 87.5
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 5.9e-32 140.6 80 85.0
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 7.7e-32 140.2 80 85.0
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 7.7e-32 140.2 80 85.0
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 7.7e-32 140.2 80 85.0
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 1.0e-31 139.8 80 86.2
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 1.3e-31 139.4 80 83.8
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 1.7e-31 139.0 80 82.5
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 1.7e-31 139.0 82 81.7
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 1.7e-31 139.0 80 82.5
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 2.2e-31 138.7 80 85.0
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 2.2e-31 138.7 80 85.0
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 2.9e-31 138.3 80 83.8
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 3.8e-31 137.9 80 81.2
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 6.5e-31 137.1 80 85.0
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 8.5e-31 136.7 80 85.0
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 8.5e-31 136.7 80 82.5
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 8.5e-31 136.7 80 83.8
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 1.1e-30 136.3 80 83.8
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 1.5e-30 136.0 80 82.5
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 2.5e-30 135.2 80 78.8
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 2.5e-30 135.2 93 77.4
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 4.2e-30 134.4 85 77.6
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 5.5e-30 134.0 80 83.8
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 1.2e-29 132.9 80 81.2
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 1.6e-29 132.5 80 76.2
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 1.6e-29 132.5 80 76.2
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 1.6e-29 132.5 80 83.8
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 2.1e-29 132.1 80 81.2
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 2.1e-29 132.1 81 82.7
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 2.7e-29 131.7 80 82.5
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 2.7e-29 131.7 80 82.5
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 4.7e-29 131.0 80 81.2
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 6.1e-29 130.6 80 80.0
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 6.1e-29 130.6 81 81.5
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 1.0e-28 129.8 78 78.2
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 1.4e-28 129.4 97 72.2
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 1.8e-28 129.0 80 76.2
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 1.8e-28 129.0 80 76.2
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 5.2e-28 127.5 86 70.9
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 5.2e-28 127.5 86 70.9
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 5.2e-28 127.5 86 70.9
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 8.8e-28 126.7 80 75.0
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 1.2e-27 126.3 80 75.0
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 1.2e-27 126.3 80 75.0
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 2.0e-27 125.6 80 73.8
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 5.7e-27 124.0 80 72.5
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 1.7e-26 122.5 84 71.4
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 2.8e-26 121.7 99 67.7
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 4.8e-26 120.9 82 79.3
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 1.1e-25 119.8 80 72.5
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 2.4e-25 118.6 80 76.2
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 4.1e-25 117.9 90 72.2
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 5.9e-24 114.0 75 77.3
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 1.1e-22 109.8 79 69.6
Cpa.g.sc7.234 Carica papaya HOM05D006132 ORTHO05D007305 9.8e-19 96.7 55 85.5
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 1.7e-18 95.9 55 83.6
CDE12G0288 Ceratophyllum demersum HOM05D004517 ORTHO05D005366 1.1e-17 93.2 74 67.6
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 2.7e-16 88.6 61 73.8
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 1.2e-13 79.7 55 67.3
SHI18802 Sapria himalayana HOM05D006132 ORTHO05D007305 2.1e-13 79.0 54 72.2
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 2.6e-11 72.0 81 49.4
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 8.3e-10 67.0 87 47.1
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 4.1e-09 64.7 81 43.2
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 4.5e-08 61.2 81 42.0


User provided reference genes

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