Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G105000 Glycine max HOM05D006994 ORTHO05D008229 1.1e-59 233.0 116 100.0
Glyma.08G310800 Glycine max HOM05D006994 ORTHO05D008229 1.7e-42 176.0 115 76.5
VMungo0540G1807 Vigna mungo HOM05D006994 ORTHO05D008229 1.4e-36 156.4 121 64.5
Phvul.006G035050 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 4.8e-18 94.7 57 73.7
Duzib147G0646 Durio zibethinus HOM05D006994 ORTHO05D008229 7.2e-14 80.9 105 48.6
Cfa022555 Carpinus fangiana HOM05D006994 ORTHO05D008229 9.4e-14 80.5 129 42.6
Duzib187G0002 Durio zibethinus HOM05D006994 ORTHO05D008229 1.6e-13 79.7 117 41.9
RcHm_v2.0_Chr2g0150941 Rosa chinensis HOM05D006994 ORTHO05D008229 2.3e-12 75.9 115 43.5
Thecc.01G159900 Theobroma cacao HOM05D006994 ORTHO05D008229 3.0e-12 75.5 67 59.7
QL08p043727 Quercus lobata HOM05D006994 ORTHO05D008229 4.0e-12 75.1 128 41.4
CiPaw.03G188200 Carya illinoinensis HOM05D006994 ORTHO05D008229 8.8e-12 73.9 84 48.8
Gorai.006G007500 Gossypium raimondii HOM05D006994 ORTHO05D008229 1.2e-11 73.6 71 54.9
Ciclev10030533m.g Citrus clementina HOM05D006994 ORTHO05D008229 2.0e-11 72.8 84 47.6
Gohir.A09G006800 Gossypium hirsutum HOM05D006994 ORTHO05D008229 2.0e-11 72.8 70 54.3
Gohir.D09G005900 Gossypium hirsutum HOM05D006994 ORTHO05D008229 3.4e-11 72.0 71 56.3
Prupe.3G170300 Prunus persica HOM05D006994 ORTHO05D008229 3.4e-11 72.0 126 40.5
VMungo0647G0009 Vigna mungo HOM05D006994 ORTHO05D008229 5.7e-11 71.2 89 49.4
Dinv12707 Davidia involucrata HOM05D006994 ORTHO05D008229 7.5e-11 70.9 84 47.6
MD09G1155600 Malus domestica HOM05D006994 ORTHO05D008229 9.8e-11 70.5 126 40.5
TAR627G0262 Trochodendron aralioides HOM05D006994 ORTHO05D008229 9.8e-11 70.5 73 53.4
Phvul.008G190400 Phaseolus vulgaris HOM05D006994 ORTHO05D008229 1.7e-10 69.7 89 49.4
Aqoxy4G00195 Aquilegia oxysepala HOM05D006994 ORTHO05D008229 2.8e-10 68.9 68 57.4
arahy.Tifrunner.gnm1.ann1.EW4W42 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.8e-10 68.9 108 40.7
COL.COLO4_33721 Corchorus olitorius HOM05D006994 ORTHO05D008229 3.7e-10 68.6 67 58.2
Glyma.02G288000 Glycine max HOM05D006994 ORTHO05D008229 4.8e-10 68.2 89 48.3
Glyma.14G026900 Glycine max HOM05D006994 ORTHO05D008229 4.8e-10 68.2 69 53.6
CSS0008190 Camellia sinensis var. sinensis HOM05D006994 ORTHO05D008229 1.1e-09 67.0 67 52.2
Actinidia32524 Actinidia chinensis HOM05D006994 ORTHO05D008229 1.4e-09 66.6 86 43.0
arahy.Tifrunner.gnm1.ann1.0D28PY Arachis hypogaea HOM05D006994 ORTHO05D008229 2.4e-09 65.9 83 48.2
arahy.Tifrunner.gnm1.ann1.0VWG63 Arachis hypogaea HOM05D006994 ORTHO05D008229 2.4e-09 65.9 105 39.0
arahy.Tifrunner.gnm1.ann1.T2GFFQ Arachis hypogaea HOM05D006994 ORTHO05D008229 2.4e-09 65.9 83 48.2
FvH4_6g37820 Fragaria vesca HOM05D006994 ORTHO05D008229 4.1e-09 65.1 115 38.3
FAN14G2472 Fragaria x ananassa HOM05D006994 ORTHO05D008229 4.1e-09 65.1 115 38.3
Cpa.g.sc50.71 Carica papaya HOM05D006994 ORTHO05D008229 5.4e-09 64.7 100 39.0
CDE02G3923 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 5.4e-09 64.7 61 52.5
Hma1.2p1_0036F.1_g023730 Hydrangea macrophylla HOM05D006994 ORTHO05D008229 9.1e-09 63.9 78 48.7
Nn3g20985 Nelumbo nucifera HOM05D006994 ORTHO05D008229 1.6e-08 63.2 59 55.9
TAR629G2429 Trochodendron aralioides HOM05D006994 ORTHO05D008229 1.6e-08 63.2 80 45.0
FAN02G4438 Fragaria x ananassa HOM05D006994 ORTHO05D008229 2.0e-08 62.8 112 37.5
CDE08G1216 Ceratophyllum demersum HOM05D006994 ORTHO05D008229 2.7e-08 62.4 61 50.8
Atru.chr6.1474 Acer truncatum HOM05D006994 ORTHO05D008229 4.5e-08 61.6 105 43.8
Nn6g34417 Nelumbo nucifera HOM05D006994 ORTHO05D008229 5.9e-08 61.2 67 52.2
Ca_06289_v3 Cicer arietinum L. HOM05D006994 ORTHO05D008229 7.7e-08 60.8 86 47.7
FAN09G0855 Fragaria x ananassa HOM05D006994 ORTHO05D008229 1.0e-07 60.5 112 36.6
Dinv06483 Davidia involucrata HOM05D006994 ORTHO05D008229 1.3e-07 60.1 67 49.3
Medtr5g091810 Medicago truncatula HOM05D006994 ORTHO05D008229 2.3e-07 59.3 86 47.7
Eucgr.A01960 Eucalyptus grandis HOM05D006994 ORTHO05D008229 6.6e-07 57.8 118 37.3
vmacro23412 Vaccinium macrocarpon HOM05D006994 ORTHO05D008229 1.9e-06 56.2 62 46.8
TPR.G12670 Trifolium pratense HOM05D006994 ORTHO05D008229 2.5e-06 55.8 86 45.3
Rhsim06G0121200 Rhododendron simsii HOM05D006994 ORTHO05D008229 7.2e-06 54.3 59 49.2
CsaV3_6G037970 Cucumis sativus L. HOM05D006994 ORTHO05D008229 9.5e-06 53.9 60 48.3


User provided reference genes

Program Settings