Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.1e-268 929.5 493 100.0
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 8.7e-242 840.1 497 91.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 3.4e-222 775.0 497 84.9
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.8e-221 771.5 497 84.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.6e-219 766.1 496 82.5
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.8e-215 752.7 494 80.8
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 9.3e-212 740.3 496 78.8
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.3e-210 736.5 495 80.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 3.0e-210 735.3 495 80.0
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 5.9e-206 721.1 495 77.2
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.7e-203 712.2 495 77.8
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.5e-201 706.4 496 76.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 3.4e-190 668.7 503 74.6
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 7.7e-190 667.5 496 71.4
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 8.2e-184 647.5 493 70.8
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.8e-183 646.4 497 70.2
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.8e-183 646.4 496 71.4
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 6.1e-179 631.3 500 70.2
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.0e-178 630.6 499 70.5
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.8e-178 629.8 497 67.4
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.5e-177 626.7 500 69.6
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 7.5e-177 624.4 495 67.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.3e-176 623.6 494 68.6
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 3.7e-176 622.1 494 68.6
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 5.3e-175 618.2 503 68.8
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 1.2e-174 617.1 502 69.5
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.6e-174 616.7 510 67.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.7e-173 613.2 496 68.1
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 8.5e-173 610.9 497 67.6
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.5e-172 610.1 498 67.3
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 5.5e-172 608.2 500 65.8
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.8e-170 603.2 500 66.8
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.8e-170 603.2 496 66.7
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 4.0e-170 602.1 499 67.7
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 8.8e-170 600.9 497 66.6
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 8.8e-170 600.9 497 66.6
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 2.6e-169 599.4 501 67.3
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.3e-168 597.0 499 66.7
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.7e-168 596.7 496 66.5
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.8e-168 595.9 499 67.1
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.4e-167 593.6 494 65.8
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 9.1e-167 590.9 500 65.6
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 4.5e-166 588.6 522 64.4
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 8.6e-165 584.3 496 63.9
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.1e-164 583.9 494 65.4
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.3e-164 582.4 488 66.8
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.2e-163 580.5 514 64.0
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 3.6e-163 578.9 496 63.5
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.3e-162 576.2 505 64.0
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 8.9e-162 574.3 522 63.2
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.2e-160 569.7 496 63.7
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 4.9e-160 568.5 505 63.0
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 5.4e-159 565.1 500 62.2
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 9.2e-159 564.3 495 62.2
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 3.5e-158 562.4 494 63.6
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 2.3e-157 559.7 551 59.2
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.8e-155 552.7 516 59.9
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.3e-154 549.7 496 60.5
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 3.0e-154 549.3 509 61.5
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 4.0e-154 548.9 494 61.1
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 8.9e-154 547.7 518 61.0
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 5.8e-153 545.0 516 59.7
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 5.8e-153 545.0 518 62.0
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 7.5e-153 544.7 514 60.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.3e-152 543.9 511 58.9
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.9e-151 540.0 515 61.7
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.2e-151 539.3 499 62.9
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 6.0e-150 535.0 508 60.8
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.3e-149 533.1 511 59.7
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 5.6e-148 528.5 512 59.6
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 7.3e-148 528.1 525 59.0
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 3.1e-146 522.7 511 58.7
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 4.0e-146 522.3 505 59.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.0e-145 520.0 516 58.1
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 2.0e-145 520.0 511 56.6
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 5.8e-145 518.5 501 59.5
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.7e-144 516.9 493 60.0
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 3.7e-144 515.8 512 58.8
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 6.4e-144 515.0 545 56.7
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.4e-143 513.1 512 58.4
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 5.4e-143 511.9 508 57.5
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 6.0e-142 508.4 511 58.3
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.3e-141 506.5 507 58.4
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 2.2e-136 490.0 511 57.7
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 3.7e-136 489.2 511 57.5
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.4e-135 487.3 508 55.3
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.9e-135 486.9 511 56.2
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 2.3e-133 479.9 404 62.6
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 2.8e-131 473.0 492 56.9
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.7e-128 463.8 501 56.5
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.6e-126 457.2 345 67.2
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 2.1e-126 456.8 495 56.8
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 1.1e-119 434.5 361 67.9
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.4e-119 434.1 512 50.6
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 7.1e-119 431.8 364 68.1
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 1.7e-104 384.0 526 45.8
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.4e-104 381.7 333 66.1
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.8e-101 374.0 517 46.2
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 8.2e-99 365.2 501 45.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 3.4e-89 333.2 575 39.8
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 5.7e-84 315.8 351 56.1
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 5.2e-69 266.2 189 69.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 5.7e-60 236.1 359 44.6
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 4.5e-57 226.5 559 34.0
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 6.6e-40 169.5 190 55.8
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.0e-37 162.2 146 58.2
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 4.6e-33 146.7 320 37.8
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 2.2e-27 127.9 106 61.3
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.9e-23 114.8 320 35.0
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.0e-20 104.8 148 43.2
Glyma.17G104500 Glycine max HOM05D004574 ORTHO05D005612 1.3e-06 58.9 84 44.0
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 3.6e-06 57.4 52 51.9
Glyma.13G156900 Glycine max HOM05D004574 ORTHO05D005612 4.8e-06 57.0 84 44.0
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 4.8e-06 57.0 50 58.0
arahy.Tifrunner.gnm1.ann1.YXSX85 Arachis hypogaea HOM05D004574 ORTHO05D005612 6.2e-06 56.6 69 43.5
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 6.2e-06 56.6 65 43.1
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 6.2e-06 56.6 49 55.1
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 8.1e-06 56.2 43 67.4


User provided reference genes

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