Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G062700 Glycine max HOM05D001948 ORTHO05D001873 3.7e-85 318.2 160 100.0
Lj6g0010194 Lotus japonicus HOM05D001948 ORTHO05D001873 6.4e-21 104.8 94 57.4
TPR.G21185 Trifolium pratense HOM05D001948 ORTHO05D001873 1.9e-17 93.2 89 52.8
Duzib168G1714 Durio zibethinus HOM05D001948 ORTHO05D001873 5.6e-17 91.7 99 50.5
Medtr3g463920 Medicago truncatula HOM05D001948 ORTHO05D001873 7.4e-17 91.3 90 52.2
Duzib170G0625 Durio zibethinus HOM05D001948 ORTHO05D001873 1.3e-16 90.5 89 51.7
Psat5g159440 Pisum sativum HOM05D001948 ORTHO05D001873 1.3e-16 90.5 91 51.6
Potri.001G251900 Populus trichocarpa HOM05D001948 ORTHO05D001873 4.8e-16 88.6 99 50.5
QL01p038315 Quercus lobata HOM05D001948 ORTHO05D001873 4.8e-16 88.6 94 46.8
Prupe.6G057100 Prunus persica HOM05D001948 ORTHO05D001873 1.8e-15 86.7 90 48.9
vmacro02959 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 5.3e-15 85.1 111 42.3
COL.COLO4_19162 Corchorus olitorius HOM05D000683 ORTHO05D000507 6.9e-15 84.7 133 39.1
TAR633G1533 Trochodendron aralioides HOM05D001948 ORTHO05D001873 9.0e-15 84.3 86 51.2
MD11G1073800 Malus domestica HOM05D001948 ORTHO05D001873 2.6e-14 82.8 99 46.5
Dinv28643 Davidia involucrata HOM05D001948 ORTHO05D001873 3.4e-14 82.4 89 48.3
FvH4_3g38600 Fragaria vesca HOM05D001948 ORTHO05D001873 4.5e-14 82.0 95 44.2
RcHm_v2.0_Chr5g0069661 Rosa chinensis HOM05D001948 ORTHO05D001873 7.6e-14 81.3 94 43.6
TWI31G0364 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 1.3e-13 80.5 92 43.5
FAN21G1884 Fragaria x ananassa HOM05D001948 ORTHO05D001873 2.2e-13 79.7 95 43.2
Haze_24330 Corylus avellana HOM05D001948 ORTHO05D001873 2.9e-13 79.3 85 48.2
CSS0014491 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 4.9e-13 78.6 89 47.2
CSS0038822 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 4.9e-13 78.6 96 45.8
Nn2g13714 Nelumbo nucifera HOM05D001948 ORTHO05D001873 6.5e-13 78.2 96 40.6
Actinidia16096 Actinidia chinensis HOM05D001948 ORTHO05D001873 8.4e-13 77.8 89 44.9
Actinidia20734 Actinidia chinensis HOM05D001948 ORTHO05D001873 1.1e-12 77.4 90 46.7
FAN11G1195 Fragaria x ananassa HOM05D000683 ORTHO05D000507 1.1e-12 77.4 94 42.6
FAN25G2787 Fragaria x ananassa HOM05D001948 ORTHO05D001873 1.1e-12 77.4 95 44.2
vmacro08875 Vaccinium macrocarpon HOM05D001948 ORTHO05D001873 1.1e-12 77.4 99 43.4
CiPaw.13G077200 Carya illinoinensis HOM05D001948 ORTHO05D001873 1.4e-12 77.0 89 44.9
Potri.006G100400 Populus trichocarpa HOM05D001948 ORTHO05D001873 1.4e-12 77.0 101 42.6
Thecc.09G301400 Theobroma cacao HOM05D001948 ORTHO05D001873 1.4e-12 77.0 109 42.2
PGR119G1768 Punica granatum HOM05D001948 ORTHO05D001873 1.9e-12 76.6 95 44.2
Rhsim04G0128400 Rhododendron simsii HOM05D001948 ORTHO05D001873 3.2e-12 75.9 99 40.4
CiPaw.14G059300 Carya illinoinensis HOM05D001948 ORTHO05D001873 4.2e-12 75.5 79 49.4
MBI18_g24469_MAGBIO Magnolia biondii HOM05D001948 ORTHO05D001873 5.5e-12 75.1 95 42.1
Sc12g0000670 Simmondsia chinensis HOM05D001948 ORTHO05D001873 5.5e-12 75.1 110 35.5
Dinv05133 Davidia involucrata HOM05D001948 ORTHO05D001873 9.3e-12 74.3 89 44.9
Ciclev10030173m.g Citrus clementina HOM05D001948 ORTHO05D001873 1.2e-11 73.9 89 42.7
TAR636G0792 Trochodendron aralioides HOM05D001948 ORTHO05D001873 2.7e-11 72.8 97 43.3
GSVIVG01024737001 Vitis vinifera HOM05D001948 ORTHO05D001873 3.5e-11 72.4 98 41.8
Manes.01G161200 Manihot esculenta HOM05D001948 ORTHO05D001873 4.6e-11 72.0 112 36.6
CSS0005846 Camellia sinensis var. sinensis HOM05D001948 ORTHO05D001873 6.1e-11 71.6 88 47.7
Eucgr.J01909 Eucalyptus grandis HOM05D001948 ORTHO05D001873 6.1e-11 71.6 126 34.9
Nn2g11506 Nelumbo nucifera HOM05D001948 ORTHO05D001873 6.1e-11 71.6 89 42.7
Nn2g11508 Nelumbo nucifera HOM05D001948 ORTHO05D001873 6.1e-11 71.6 89 42.7
Actinidia05366 Actinidia chinensis HOM05D001948 ORTHO05D001873 1.0e-10 70.9 80 50.0
Dinv01590 Davidia involucrata HOM05D001948 ORTHO05D001873 1.0e-10 70.9 86 45.3
TWI53G2049 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 1.0e-10 70.9 101 40.6
Cc01_g14240 Coffea canephora HOM05D001948 ORTHO05D001873 1.3e-10 70.5 78 50.0
Haze_21004 Corylus avellana HOM05D001948 ORTHO05D001873 1.3e-10 70.5 91 42.9
Sabra16G0111900 Salix brachista HOM05D001948 ORTHO05D001873 1.8e-10 70.1 99 40.4
Gohir.A05G088600 Gossypium hirsutum HOM05D001948 ORTHO05D001873 2.3e-10 69.7 101 43.6
Gohir.D05G089600 Gossypium hirsutum HOM05D001948 ORTHO05D001873 2.3e-10 69.7 101 44.6
Gorai.009G092000 Gossypium raimondii HOM05D001948 ORTHO05D001873 2.3e-10 69.7 101 44.6
Dinv23109 Davidia involucrata HOM05D001948 ORTHO05D001873 3.0e-10 69.3 86 45.3
Manes.09G104925 Manihot esculenta HOM05D001948 ORTHO05D001873 3.0e-10 69.3 109 41.3
TWI77G0956 Tripterygium wilfordii HOM05D001948 ORTHO05D001873 3.0e-10 69.3 110 43.6
CiPaw.10G156700 Carya illinoinensis HOM05D001948 ORTHO05D001873 3.9e-10 68.9 98 38.8
Lj2C75T2 Lonicera japonica HOM05D001948 ORTHO05D001873 6.7e-10 68.2 89 40.4
Sabra06G0077200 Salix brachista HOM05D001948 ORTHO05D001873 6.7e-10 68.2 101 39.6
CiPaw.09G209300 Carya illinoinensis HOM05D001948 ORTHO05D001873 8.7e-10 67.8 96 39.6
Atru.chr8.2243 Acer truncatum HOM05D001948 ORTHO05D001873 1.1e-09 67.4 97 37.1
Eucgr.K02982 Eucalyptus grandis HOM05D001948 ORTHO05D001873 1.1e-09 67.4 85 44.7
FvH4_6g11430 Fragaria vesca HOM05D001948 ORTHO05D001873 1.1e-09 67.4 98 40.8
FAN14G4049 Fragaria x ananassa HOM05D001948 ORTHO05D001873 1.1e-09 67.4 98 40.8
FAN14G5042 Fragaria x ananassa HOM05D001948 ORTHO05D001873 1.1e-09 67.4 98 40.8
MD04G1153100 Malus domestica HOM05D001948 ORTHO05D001873 1.1e-09 67.4 99 40.4
PGR004G0061 Punica granatum HOM05D001948 ORTHO05D001873 1.1e-09 67.4 98 40.8
RcHm_v2.0_Chr3g0463121 Rosa chinensis HOM05D001948 ORTHO05D001873 1.1e-09 67.4 85 42.4
Cfa017204 Carpinus fangiana HOM05D001948 ORTHO05D001873 1.5e-09 67.0 105 36.2
FAN02G2396 Fragaria x ananassa HOM05D001948 ORTHO05D001873 1.5e-09 67.0 98 39.8
MD03G1070000 Malus domestica HOM05D001948 ORTHO05D001873 1.9e-09 66.6 107 41.1
QL07p019775 Quercus lobata HOM05D001948 ORTHO05D001873 2.5e-09 66.2 101 37.6
FAN09G4022 Fragaria x ananassa HOM05D001948 ORTHO05D001873 3.3e-09 65.9 98 38.8
Duzib093G1794 Durio zibethinus HOM05D001948 ORTHO05D001873 4.3e-09 65.5 95 36.8
FAN05G5492 Fragaria x ananassa HOM05D001948 ORTHO05D001873 4.3e-09 65.5 98 38.8
Aqoxy4G02557 Aquilegia oxysepala HOM05D001948 ORTHO05D001873 5.7e-09 65.1 89 41.6
Cpa.g.sc112.25 Carica papaya HOM05D001948 ORTHO05D001873 5.7e-09 65.1 81 46.9
Potri.016G116300 Populus trichocarpa HOM05D001948 ORTHO05D001873 7.4e-09 64.7 105 37.1
Cpa.g.sc11.143 Carica papaya HOM05D001948 ORTHO05D001873 1.3e-08 63.9 80 40.0
Duzib128G0126 Durio zibethinus HOM05D001948 ORTHO05D001873 1.3e-08 63.9 96 33.3
Thecc.05G015900 Theobroma cacao HOM05D001948 ORTHO05D001873 1.6e-08 63.5 96 35.4
Hma1.2p1_0962F.1_g241890 Hydrangea macrophylla HOM05D001948 ORTHO05D001873 3.7e-08 62.4 89 40.4
Glyma.07G150500 Glycine max HOM05D001948 ORTHO05D001873 4.8e-08 62.0 80 42.5
Aa31LG5G23750 Aethionema arabicum HOM05D001948 ORTHO05D001873 6.3e-08 61.6 99 38.4
GSVIVG01011154001 Vitis vinifera HOM05D001948 ORTHO05D001873 6.3e-08 61.6 89 40.4
Ciclev10013662m.g Citrus clementina HOM05D001948 ORTHO05D001873 1.1e-07 60.8 104 36.5
Prupe.6G277400 Prunus persica HOM05D001948 ORTHO05D001873 1.1e-07 60.8 85 40.0
BcaC01g05563 Brassica carinata HOM05D001948 ORTHO05D001873 1.4e-07 60.5 98 34.7
C03p24900 Brassica napus HOM05D001948 ORTHO05D001873 1.4e-07 60.5 98 34.7
BolC3t14881H Brassica oleracea HOM05D001948 ORTHO05D001873 1.4e-07 60.5 98 34.7
Glyma.18G201500 Glycine max HOM05D001948 ORTHO05D001873 1.8e-07 60.1 80 41.2
CDE02G1590 Ceratophyllum demersum HOM05D001948 ORTHO05D001873 2.4e-07 59.7 91 37.4
arahy.Tifrunner.gnm1.ann1.P8JV7Z Arachis hypogaea HOM05D001948 ORTHO05D001873 4.1e-07 58.9 85 37.6
Ca_26449_v3 Cicer arietinum L. HOM05D001948 ORTHO05D001873 6.9e-07 58.2 90 36.7
COL.COLO4_14535 Corchorus olitorius HOM05D001948 ORTHO05D001873 9.0e-07 57.8 90 33.3
arahy.Tifrunner.gnm1.ann1.VN0MC0 Arachis hypogaea HOM05D001948 ORTHO05D001873 1.2e-06 57.4 85 37.6
BcaB01g03724 Brassica carinata HOM05D001948 ORTHO05D001873 1.2e-06 57.4 100 34.0
A03p21080 Brassica napus HOM05D001948 ORTHO05D001873 1.2e-06 57.4 98 33.7
BraA03t11349Z Brassica rapa HOM05D001948 ORTHO05D001873 1.2e-06 57.4 98 33.7
MD12G1166600 Malus domestica HOM05D001948 ORTHO05D001873 1.2e-06 57.4 90 41.1
Hund18844 Selenicereus undatus HOM05D001948 ORTHO05D001873 1.2e-06 57.4 90 33.3
Sabra16G0153200 Salix brachista HOM05D001948 ORTHO05D001873 1.5e-06 57.0 71 43.7
Gorai.002G263500 Gossypium raimondii HOM05D001948 ORTHO05D001873 2.0e-06 56.6 84 38.1
Gohir.D01G217200 Gossypium hirsutum HOM05D001948 ORTHO05D001873 2.6e-06 56.2 83 38.6
PSO339G0928 Papaver somniferum HOM05D001948 ORTHO05D001873 3.4e-06 55.8 91 39.6
THA.LOC104816193 Tarenaya hassleriana HOM05D001948 ORTHO05D001873 3.4e-06 55.8 90 38.9
VMungo1383G2266 Vigna mungo HOM05D001948 ORTHO05D001873 3.4e-06 55.8 93 36.6
Psat3g129320 Pisum sativum HOM05D001948 ORTHO05D001873 5.9e-06 55.1 90 32.2
TPR.G8411 Trifolium pratense HOM05D001948 ORTHO05D001873 5.9e-06 55.1 91 36.3
Cc06_g01340 Coffea canephora HOM05D001948 ORTHO05D001873 7.7e-06 54.7 79 34.2


User provided reference genes

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