Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.18G056300 Glycine max HOM05D005258 ORTHO05D006525 9.7e-261 902.9 438 100.0
Glyma.11G163000 Glycine max HOM05D005258 ORTHO05D006525 9.1e-243 843.2 440 93.9
Phvul.006G074900 Phaseolus vulgaris HOM05D005258 ORTHO05D006525 8.2e-228 793.5 440 88.0
Lj6g0021320 Lotus japonicus HOM05D005258 ORTHO05D006525 8.9e-214 746.9 438 82.6
Lj2g0020421 Lotus japonicus HOM05D005258 ORTHO05D006525 3.4e-213 745.0 438 82.2
Psat5g152360 Pisum sativum HOM05D005258 ORTHO05D006525 5.9e-210 734.2 440 81.4
Ca_15017_v3 Cicer arietinum L. HOM05D005258 ORTHO05D006525 1.3e-209 733.0 440 81.6
Medtr3g031280 Medicago truncatula HOM05D005258 ORTHO05D006525 1.1e-203 713.4 444 79.1
Lalb_Chr18g0051461 Lupinus albus HOM05D005258 ORTHO05D006525 4.1e-203 711.4 449 79.1
arahy.Tifrunner.gnm1.ann1.0U7N6T Arachis hypogaea HOM05D005258 ORTHO05D006525 9.5e-200 700.3 462 75.8
arahy.Tifrunner.gnm1.ann1.R5QLIS Arachis hypogaea HOM05D005258 ORTHO05D006525 3.6e-199 698.4 441 78.9
Prupe.6G046100 Prunus persica HOM05D005258 ORTHO05D006525 2.2e-180 636.0 449 69.7
Lj2g0010469 Lotus japonicus HOM05D005258 ORTHO05D006525 1.1e-179 633.6 335 89.3
Duzib168G0041 Durio zibethinus HOM05D005258 ORTHO05D006525 7.8e-178 627.5 386 76.4
Dinv09684 Davidia involucrata HOM05D005258 ORTHO05D006525 2.3e-177 625.9 386 75.9
MD11G1060300 Malus domestica HOM05D005258 ORTHO05D006525 2.3e-177 625.9 414 71.5
Dinv12244 Davidia involucrata HOM05D005258 ORTHO05D006525 3.9e-177 625.2 386 75.6
Gohir.A08G203600 Gossypium hirsutum HOM05D005258 ORTHO05D006525 1.1e-176 623.6 386 75.6
Gohir.D08G220900 Gossypium hirsutum HOM05D005258 ORTHO05D006525 1.1e-176 623.6 386 75.4
MD03G1058000 Malus domestica HOM05D005258 ORTHO05D006525 1.1e-176 623.6 418 71.8
TPR.G25689 Trifolium pratense HOM05D005258 ORTHO05D006525 1.1e-176 623.6 335 88.7
Potri.013G153900 Populus trichocarpa HOM05D005258 ORTHO05D006525 3.3e-176 622.1 465 66.0
Eucgr.B04012 Eucalyptus grandis HOM05D005258 ORTHO05D006525 4.3e-176 621.7 383 74.7
TWI75G0534 Tripterygium wilfordii HOM05D005258 ORTHO05D006525 4.3e-176 621.7 389 74.8
QL04p095946 Quercus lobata HOM05D005258 ORTHO05D006525 5.6e-176 621.3 462 66.7
Manes.18G136600 Manihot esculenta HOM05D005258 ORTHO05D006525 7.3e-176 620.9 466 64.6
Sabra13G0123700 Salix brachista HOM05D005258 ORTHO05D006525 9.6e-176 620.5 463 65.7
FvH4_3g39930 Fragaria vesca HOM05D005258 ORTHO05D006525 1.2e-175 620.2 386 75.1
THA.LOC104813633 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 1.6e-175 619.8 381 74.5
THA.LOC104812325 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 8.1e-175 617.5 380 74.7
Gorai.004G234600 Gossypium raimondii HOM05D005258 ORTHO05D006525 1.4e-174 616.7 386 75.1
CSS0033097 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 1.8e-174 616.3 464 64.9
Cpa.g.sc53.44 Carica papaya HOM05D005258 ORTHO05D006525 2.0e-173 612.8 382 73.8
Actinidia01232 Actinidia chinensis HOM05D005258 ORTHO05D006525 2.6e-173 612.5 450 66.7
CSS0008764 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 2.6e-173 612.5 465 64.3
GSVIVG01024619001 Vitis vinifera HOM05D005258 ORTHO05D006525 2.2e-172 609.4 405 71.1
CsaV3_1G036740 Cucumis sativus L. HOM05D005258 ORTHO05D006525 4.9e-172 608.2 458 66.8
MELO3C020493.2 Cucumis melo HOM05D005258 ORTHO05D006525 1.4e-171 606.7 457 67.0
CsaV3_6G022490 Cucumis sativus L. HOM05D005258 ORTHO05D006525 1.9e-171 606.3 458 67.0
Sopen06g033760 Solanum pennellii HOM05D005258 ORTHO05D006525 4.2e-171 605.1 455 65.9
PGSC0003DMG400030379 Solanum tuberosum HOM05D005258 ORTHO05D006525 4.2e-171 605.1 456 65.6
vmacro00112 Vaccinium macrocarpon HOM05D005258 ORTHO05D006525 5.4e-171 604.7 404 71.5
Ciclev10001075m.g Citrus clementina HOM05D005258 ORTHO05D006525 7.1e-171 604.4 380 74.7
Solyc06g082370.4 Solanum lycopersicum HOM05D005258 ORTHO05D006525 7.1e-171 604.4 456 65.6
Rhsim11G0040500 Rhododendron simsii HOM05D005258 ORTHO05D006525 1.6e-170 603.2 401 70.8
PGR102G1249 Punica granatum HOM05D005258 ORTHO05D006525 2.1e-170 602.8 456 64.7
CANSAT54G1230 Cannabis sativa HOM05D005258 ORTHO05D006525 3.5e-170 602.1 454 66.3
Lj2C1095G3 Lonicera japonica HOM05D005258 ORTHO05D006525 7.8e-170 600.9 458 66.6
Nitab4.5_0015019g0010 Nicotiana tabacum HOM05D005258 ORTHO05D006525 7.8e-170 600.9 455 65.3
FAN11G2675 Fragaria x ananassa HOM05D005258 ORTHO05D006525 1.5e-168 596.7 386 73.3
Sed0015134 Sechium edule HOM05D005258 ORTHO05D006525 5.6e-168 594.7 387 72.9
Atru.chr1.2577 Acer truncatum HOM05D005258 ORTHO05D006525 7.3e-168 594.3 394 72.6
CARHR017340 Cardamine hirsuta HOM05D005258 ORTHO05D006525 7.3e-168 594.3 440 67.3
Carub.0001s1661 Capsella rubella HOM05D005258 ORTHO05D006525 2.1e-167 592.8 387 72.4
BcaB02g06669 Brassica carinata HOM05D005258 ORTHO05D006525 3.6e-167 592.0 381 72.7
HanXRQChr08g0228541 Helianthus annuus HOM05D005258 ORTHO05D006525 4.8e-167 591.7 391 70.3
AL1G29040 Arabidopsis lyrata HOM05D005258 ORTHO05D006525 1.4e-166 590.1 381 72.4
AT1G16870 Arabidopsis thaliana HOM05D005258 ORTHO05D006525 5.3e-166 588.2 387 71.6
Sp1g15010 Schrenkiella parvula HOM05D005258 ORTHO05D006525 9.0e-166 587.4 387 71.1
Sc21g0004960 Simmondsia chinensis HOM05D005258 ORTHO05D006525 3.4e-165 585.5 431 65.7
CDE06G2080 Ceratophyllum demersum HOM05D005258 ORTHO05D006525 4.5e-165 585.1 363 74.1
Lsat_1_v5_gn_9_14481 Lactuca sativa HOM05D005258 ORTHO05D006525 1.1e-163 580.5 407 67.6
MSTRG.21245 Avicennia marina HOM05D005258 ORTHO05D006525 1.9e-163 579.7 424 68.2
Thhalv10007506m.g Eutrema salsugineum HOM05D005258 ORTHO05D006525 2.4e-163 579.3 387 70.5
BcaC05g25543 Brassica carinata HOM05D005258 ORTHO05D006525 3.2e-163 578.9 387 71.6
A06p12780 Brassica napus HOM05D005258 ORTHO05D006525 7.1e-163 577.8 388 71.4
C05p15090 Brassica napus HOM05D005258 ORTHO05D006525 6.0e-162 574.7 399 69.7
Nitab4.5_0002768g0050 Nicotiana tabacum HOM05D005258 ORTHO05D006525 2.3e-161 572.8 454 63.4
Aqoxy2G00760 Aquilegia oxysepala HOM05D005258 ORTHO05D006525 3.0e-161 572.4 384 69.5
TAR624G0064 Trochodendron aralioides HOM05D005258 ORTHO05D006525 2.5e-160 569.3 386 72.0
Peaxi162Scf00390g00538 Petunia axillaris HOM05D005258 ORTHO05D006525 7.4e-160 567.8 450 64.2
ECA247G3025 Erigeron canadensis HOM05D005258 ORTHO05D006525 1.3e-159 567.0 385 68.8
CiPaw.14G053300 Carya illinoinensis HOM05D005258 ORTHO05D006525 2.8e-159 565.8 410 68.0
Haze_24429 Corylus avellana HOM05D005258 ORTHO05D006525 8.1e-159 564.3 422 66.1
Cc01_g14990 Coffea canephora HOM05D005258 ORTHO05D006525 3.1e-158 562.4 406 64.5
Migut.D00841 Erythranthe guttata HOM05D005258 ORTHO05D006525 5.3e-158 561.6 407 65.6
Nn6g33319 Nelumbo nucifera HOM05D005258 ORTHO05D006525 6.9e-158 561.2 334 77.2
MBI18_g09779_MAGBIO Magnolia biondii HOM05D005258 ORTHO05D006525 9.0e-158 560.8 409 66.7
PSO339G6698 Papaver somniferum HOM05D005258 ORTHO05D006525 3.8e-156 555.4 384 68.0
SalBow6G5766 Salvia bowleyana HOM05D005258 ORTHO05D006525 3.8e-156 555.4 460 60.9
SGA_v2.0_scaffold80G25693 Striga asiatica HOM05D005258 ORTHO05D006525 1.4e-155 553.5 508 57.5
PSO384G2283 Papaver somniferum HOM05D005258 ORTHO05D006525 2.5e-155 552.7 384 67.2
ClCG03G000160 Citrullus lanatus HOM05D005258 ORTHO05D006525 9.3e-155 550.8 479 61.2
HPP92_026488 Vanilla planifolia HOM05D005258 ORTHO05D006525 1.2e-149 533.9 368 66.8
Hund19201 Selenicereus undatus HOM05D005258 ORTHO05D006525 5.8e-149 531.6 504 56.2
Zm00001eb116240 Zea mays HOM05D005258 ORTHO05D006525 3.8e-148 528.9 368 66.3
Os07g0202900 Oryza sativa ssp. japonica HOM05D005258 ORTHO05D006525 2.5e-147 526.2 386 63.5
Cfa011791 Carpinus fangiana HOM05D005258 ORTHO05D006525 3.0e-145 519.2 452 60.8
DCAR_028395 Daucus carota HOM05D005258 ORTHO05D006525 6.3e-143 511.5 359 67.1
EL10Ac7g15872 Beta vulgaris HOM05D005258 ORTHO05D006525 5.3e-142 508.4 397 62.7
Aa31LG7G1300 Aethionema arabicum HOM05D005258 ORTHO05D006525 9.4e-139 497.7 387 64.1
SalBow6G5836 Salvia bowleyana HOM05D005258 ORTHO05D006525 1.5e-136 490.3 426 58.7
CiPaw.13G067700 Carya illinoinensis HOM05D005258 ORTHO05D006525 2.0e-136 490.0 433 60.3
Nitab4.5_0002494g0040 Nicotiana tabacum HOM05D005258 ORTHO05D006525 8.2e-135 484.6 418 59.6
HPP92_014227 Vanilla planifolia HOM05D005258 ORTHO05D006525 6.9e-134 481.5 318 69.2
unitig_747.g21452 Utricularia gibba HOM05D005258 ORTHO05D006525 3.6e-130 469.2 454 55.1
ATR0681G175 Amborella trichopoda HOM05D005258 ORTHO05D006525 1.4e-129 467.2 388 60.8
Dinv28705 Davidia involucrata HOM05D005258 ORTHO05D006525 1.1e-126 457.6 281 76.2
AUR62036231 Chenopodium quinoa HOM05D005258 ORTHO05D006525 3.3e-120 436.0 438 54.1
SEGI_17098 Sequoiadendron giganteum HOM05D005258 ORTHO05D006525 9.7e-120 434.5 358 57.8
AUR62009714 Chenopodium quinoa HOM05D005258 ORTHO05D006525 5.3e-118 428.7 324 63.6
Ah.08g215410 Amaranthus hybridus HOM05D005258 ORTHO05D006525 2.0e-117 426.8 381 57.0
VMungo0540G0790 Vigna mungo HOM05D005258 ORTHO05D006525 1.7e-116 423.7 209 97.1
COL.COLO4_11171 Corchorus olitorius HOM05D005258 ORTHO05D006525 1.5e-115 420.6 386 56.2
Thecc.09G359400 Theobroma cacao HOM05D005258 ORTHO05D006525 5.2e-113 412.1 262 74.0
VMungo0540G2447 Vigna mungo HOM05D005258 ORTHO05D006525 1.3e-111 407.5 238 84.0
Rhsim06G0112000 Rhododendron simsii HOM05D005258 ORTHO05D006525 1.4e-110 404.1 389 54.8
TAR633G1809 Trochodendron aralioides HOM05D005258 ORTHO05D006525 9.1e-102 374.8 264 67.0
CAN.G1095.27 Capsicum annuum HOM05D005258 ORTHO05D006525 1.4e-94 350.9 213 76.1
QL01p025810 Quercus lobata HOM05D005258 ORTHO05D006525 1.2e-88 331.3 294 58.2
Mapoly0019s0020 Marchantia polymorpha HOM05D005258 ORTHO05D006525 9.8e-88 328.2 389 44.0
FAN25G3091 Fragaria x ananassa HOM05D005258 ORTHO05D006525 1.1e-86 324.7 265 60.8
Pp3c11_22290 Physcomitrium patens HOM05D005258 ORTHO05D006525 1.6e-85 320.9 361 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1403 Anthoceros agrestis HOM05D005258 ORTHO05D006525 1.4e-81 307.8 359 43.7
BraA06t24438Z Brassica rapa HOM05D005258 ORTHO05D006525 4.1e-78 296.2 172 82.0
RcHm_v2.0_Chr5g0071921 Rosa chinensis HOM05D005258 ORTHO05D006525 1.2e-77 294.7 178 79.2
RcHm_v2.0_Chr5g0071911 Rosa chinensis HOM05D005258 ORTHO05D006525 5.1e-76 289.3 183 71.6
FAN16G1300 Fragaria x ananassa HOM05D005258 ORTHO05D006525 2.8e-74 283.5 177 71.8
SMO353G0383 Selaginella moellendorffii HOM05D005258 ORTHO05D006525 3.4e-72 276.6 279 47.0
FAN21G1740 Fragaria x ananassa HOM05D005258 ORTHO05D006525 8.3e-71 271.9 215 61.4
CAN.G1095.26 Capsicum annuum HOM05D005258 ORTHO05D000750 1.2e-69 268.1 319 47.6
BolC5t30224H Brassica oleracea HOM05D005258 ORTHO05D006525 2.7e-61 240.4 173 65.3
CBR_g40648 Chara braunii HOM05D005258 ORTHO05D006525 6.0e-53 212.6 297 42.1
TAR628G0009 Trochodendron aralioides HOM05D005258 ORTHO05D006525 1.0e-52 211.8 147 69.4
BcaC07g38819 Brassica carinata HOM05D005258 ORTHO05D006525 6.7e-44 182.6 238 46.2
C08p17580 Brassica napus HOM05D005258 ORTHO05D006525 1.5e-40 171.4 96 82.3
QL01p025812 Quercus lobata HOM05D005258 ORTHO05D006525 3.3e-35 153.7 88 76.1
TAR628G1613 Trochodendron aralioides HOM05D005258 ORTHO05D006525 2.9e-31 140.6 223 41.7
BolC8t49383H Brassica oleracea HOM05D005258 ORTHO05D006525 1.9e-30 137.9 73 87.7
MBI11_g20619_MAGBIO Magnolia biondii HOM05D000666 ORTHO05D001431 1.3e-28 131.7 124 55.6
PRCOL_00003540 Prasinoderma coloniale HOM05D005258 ORTHO05D006525 9.7e-27 125.6 364 31.9
CAN.G403.12 Capsicum annuum HOM05D005258 ORTHO05D006525 4.8e-26 123.2 143 47.6
BraA08t35049Z Brassica rapa HOM05D005258 ORTHO05D006525 2.9e-23 114.0 74 75.7
Lsat_1_v5_gn_3_46641 Lactuca sativa HOM05D005258 ORTHO05D006525 1.8e-20 104.8 125 43.2
CSS0045112 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 1.1e-17 95.5 69 63.8
CAN.G1538.6 Capsicum annuum HOM05D005258 ORTHO05D006525 5.5e-14 83.2 71 59.2
Lsat_1_v5_gn_3_46621 Lactuca sativa HOM05D005258 ORTHO05D006525 1.4e-12 78.6 63 60.3
Cre03.g176700 Chlamydomonas reinhardtii HOM05D005258 ORTHO05D006525 1.7e-10 71.6 81 39.5
Lsat_1_v5_gn_7_20901 Lactuca sativa HOM05D005258 ORTHO05D006525 5.3e-09 66.6 38 76.3
SalBow6G4442 Salvia bowleyana HOM05D005258 ORTHO05D010875 2.0e-08 64.7 39 71.8
A08p31260 Brassica napus HOM05D005258 ORTHO05D006525 1.7e-07 61.6 29 96.6
SalBow1G0607 Salvia bowleyana HOM05D005258 ORTHO05D362423 5.0e-07 60.1 77 40.3


User provided reference genes

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